Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZGM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZGM entry

There are 2 chains in PDB entry 5ZGM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ALA 110
B
 PRO 2ALA 110
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5ZGM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 6Right-handed 310
Helix 2
AA2
A
8 19Right-handed alpha
Helix 3
AA3
A
26 34Right-handed alpha
Helix 4
AA4
A
40 52Right-handed alpha
Helix 5
AA5
A
60 66Right-handed alpha
Helix 6
AA6
A
66 72Right-handed alpha
Helix 7
AA7
A
79 91Right-handed alpha
Helix 8
AA8
A
99 110Right-handed alpha
Helix 9
AA9
B
2 6Right-handed 310
Helix 10
AB1
B
8 18Right-handed alpha
Helix 11
AB2
B
26 34Right-handed alpha
Helix 12
AB3
B
40 52Right-handed alpha
Helix 13
AB4
B
60 66Right-handed alpha
Helix 14
AB5
B
66 72Right-handed alpha
Helix 15
AB6
B
79 91Right-handed alpha
Helix 16
AB7
B
100 110Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5ZGM.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
98 99anti-parallel
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