Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZGN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZGN entry

There are 8 chains in PDB entry 5ZGN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3PRO 71
B
 LYS 5GLN 86
C
 GLN 4ASP 175
D
 ALA 3PRO 71
E
 LYS 5GLN 86
F
 GLN 4ASP 175
G
 A 1 A 27
H
 T 1 T 27
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5ZGN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
31 68Right-handed alpha
Helix 3
AA3
B
14 28Right-handed alpha
Helix 4
AA4
B
31 52Right-handed alpha
Helix 5
AA5
B
57 70Right-handed alpha
Helix 6
AA6
B
75 86Right-handed alpha
Helix 7
AA7
C
25 35Right-handed alpha
Helix 8
AA8
C
36 39Right-handed 310
Helix 9
AA9
C
101 104Right-handed 310
Helix 10
AB1
C
107 125Right-handed alpha
Helix 11
AB2
C
138 148Right-handed alpha
Helix 12
AB3
C
154 158Right-handed 310
Helix 13
AB4
C
165 175Right-handed alpha
Helix 14
AB5
D
14 28Right-handed alpha
Helix 15
AB6
D
31 68Right-handed alpha
Helix 16
AB7
E
14 28Right-handed alpha
Helix 17
AB8
E
31 52Right-handed alpha
Helix 18
AB9
E
57 70Right-handed alpha
Helix 19
AC1
E
75 86Right-handed alpha
Helix 20
AC2
F
25 35Right-handed alpha
Helix 21
AC3
F
101 104Right-handed 310
Helix 22
AC4
F
107 125Right-handed alpha
Helix 23
AC5
F
138 148Right-handed alpha
Helix 24
AC6
F
154 158Right-handed 310
Helix 25
AC7
F
165 175Right-handed alpha
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There are 6 sheets in PDB entry 5ZGN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 13first strand
Strand 2
B
7 13anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
C
59 72parallel
Strand 3
C
46 51anti-parallel
Strand 4
C
6 9anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
C
59 72parallel
Strand 3
C
88 99anti-parallel
Strand 4
C
131 135parallel
Strand 5
C
160 164anti-parallel
Strand 6
C
151 152anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
7 13first strand
Strand 2
E
7 13anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
53 56first strand
Strand 2
F
59 72parallel
Strand 3
F
46 51anti-parallel
Strand 4
F
6 9anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
53 56first strand
Strand 2
F
59 72parallel
Strand 3
F
88 99anti-parallel
Strand 4
F
131 135parallel
Strand 5
F
160 164anti-parallel
Strand 6
F
151 152anti-parallel
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