Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZHB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZHB entry

There are 2 chains in PDB entry 5ZHB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 388
B	MET 1	GLY 389

There are 26 helices in PDB entry 5ZHB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	15	Right-handed alpha
Helix 2	AA2	A	15	22	Right-handed alpha
Helix 3	AA3	A	49	67	Right-handed alpha
Helix 4	AA4	A	68	85	Right-handed alpha
Helix 5	AA5	A	111	129	Right-handed alpha
Helix 6	AA6	A	130	146	Right-handed alpha
Helix 7	AA7	A	183	200	Right-handed alpha
Helix 8	AA8	A	202	219	Right-handed alpha
Helix 9	AA9	A	245	263	Right-handed alpha
Helix 10	AB1	A	266	284	Right-handed alpha
Helix 11	AB2	A	306	324	Right-handed alpha
Helix 12	AB3	A	325	343	Right-handed alpha
Helix 13	AB4	A	374	388	Right-handed alpha
Helix 14	AB5	B	2	15	Right-handed alpha
Helix 15	AB6	B	15	23	Right-handed alpha
Helix 16	AB7	B	49	67	Right-handed alpha
Helix 17	AB8	B	68	85	Right-handed alpha
Helix 18	AB9	B	111	129	Right-handed alpha
Helix 19	AC1	B	130	146	Right-handed alpha
Helix 20	AC2	B	183	200	Right-handed alpha
Helix 21	AC3	B	202	219	Right-handed alpha
Helix 22	AC4	B	245	262	Right-handed alpha
Helix 23	AC5	B	266	284	Right-handed alpha
Helix 24	AC6	B	306	324	Right-handed alpha
Helix 25	AC7	B	325	343	Right-handed alpha
Helix 26	AC8	B	374	389	Right-handed alpha

There are 14 sheets in PDB entry 5ZHB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	35	first strand
Strand 2	A	41	42	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	48	first strand
Strand 2	A	97	98	anti-parallel
Strand 3	A	104	106	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	110	first strand
Strand 2	A	159	160	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	149	150	first strand
Strand 2	A	155	156	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	182	first strand
Strand 2	A	231	232	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	244	first strand
Strand 2	A	294	296	anti-parallel
Strand 3	A	299	301	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	305	first strand
Strand 2	A	355	356	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	35	first strand
Strand 2	B	41	42	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	48	first strand
Strand 2	B	97	98	anti-parallel
Strand 3	B	104	106	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	159	160	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	150	first strand
Strand 2	B	155	156	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	182	first strand
Strand 2	B	231	232	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	244	first strand
Strand 2	B	294	296	anti-parallel
Strand 3	B	299	301	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	305	first strand
Strand 2	B	355	356	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZHB

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZHB