Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZHH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZHH entry

There are 4 chains in PDB entry 5ZHH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR -1	TRP 266
B	THR -1	TRP 266
C	MET -2	TRP 266
D	MET -2	GLU 267

There are 39 helices in PDB entry 5ZHH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	-1	23	Right-handed alpha
Helix 2	AA2	A	41	59	Right-handed alpha
Helix 3	AA3	A	88	95	Right-handed alpha
Helix 4	AA4	A	147	151	Right-handed 310
Helix 5	AA5	A	168	179	Right-handed alpha
Helix 6	AA6	A	187	197	Right-handed alpha
Helix 7	AA7	A	209	223	Right-handed alpha
Helix 8	AA8	A	236	240	Right-handed 310
Helix 9	AA9	A	249	259	Right-handed alpha
Helix 10	AB1	A	262	266	Right-handed 310
Helix 11	AB2	B	0	23	Right-handed alpha
Helix 12	AB3	B	41	59	Right-handed alpha
Helix 13	AB4	B	88	95	Right-handed alpha
Helix 14	AB5	B	168	179	Right-handed alpha
Helix 15	AB6	B	187	197	Right-handed alpha
Helix 16	AB7	B	209	223	Right-handed alpha
Helix 17	AB8	B	236	240	Right-handed 310
Helix 18	AB9	B	249	258	Right-handed alpha
Helix 19	AC1	B	262	266	Right-handed 310
Helix 20	AC2	C	-1	24	Right-handed alpha
Helix 21	AC3	C	41	59	Right-handed alpha
Helix 22	AC4	C	88	95	Right-handed alpha
Helix 23	AC5	C	147	150	Right-handed 310
Helix 24	AC6	C	168	179	Right-handed alpha
Helix 25	AC7	C	187	197	Right-handed alpha
Helix 26	AC8	C	209	223	Right-handed alpha
Helix 27	AC9	C	236	240	Right-handed 310
Helix 28	AD1	C	249	259	Right-handed alpha
Helix 29	AD2	C	262	266	Right-handed 310
Helix 30	AD3	D	-1	23	Right-handed alpha
Helix 31	AD4	D	41	59	Right-handed alpha
Helix 32	AD5	D	88	95	Right-handed alpha
Helix 33	AD6	D	147	151	Right-handed 310
Helix 34	AD7	D	168	179	Right-handed alpha
Helix 35	AD8	D	187	197	Right-handed alpha
Helix 36	AD9	D	209	223	Right-handed alpha
Helix 37	AE1	D	236	240	Right-handed 310
Helix 38	AE2	D	249	259	Right-handed alpha
Helix 39	AE3	D	262	266	Right-handed 310

There are 8 sheets in PDB entry 5ZHH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	72	first strand
Strand 2	A	63	66	anti-parallel
Strand 3	A	79	87	parallel
Strand 4	A	100	107	anti-parallel
Strand 5	A	110	118	anti-parallel
Strand 6	A	123	128	anti-parallel
Strand 7	A	132	135	anti-parallel
Strand 8	A	138	139	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	182	183	first strand
Strand 2	A	153	155	parallel
Strand 3	A	202	205	parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	226	228	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	65	first strand
Strand 2	B	79	87	parallel
Strand 3	B	100	107	anti-parallel
Strand 4	B	110	118	anti-parallel
Strand 5	B	123	128	anti-parallel
Strand 6	B	132	135	anti-parallel
Strand 7	B	138	139	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	183	first strand
Strand 2	B	153	155	parallel
Strand 3	B	202	205	parallel
Strand 4	B	242	245	anti-parallel
Strand 5	B	226	228	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	65	first strand
Strand 2	C	79	87	parallel
Strand 3	C	100	107	anti-parallel
Strand 4	C	110	118	anti-parallel
Strand 5	C	123	128	anti-parallel
Strand 6	C	132	135	anti-parallel
Strand 7	C	138	139	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	152	155	parallel
Strand 3	C	202	205	parallel
Strand 4	C	242	245	anti-parallel
Strand 5	C	226	228	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	64	first strand
Strand 2	D	79	87	parallel
Strand 3	D	100	107	anti-parallel
Strand 4	D	110	118	anti-parallel
Strand 5	D	123	128	anti-parallel
Strand 6	D	132	135	anti-parallel
Strand 7	D	138	139	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	182	183	first strand
Strand 2	D	153	155	parallel
Strand 3	D	202	205	parallel
Strand 4	D	242	245	anti-parallel
Strand 5	D	226	228	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZHH

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZHH