Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZHT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZHT entry

There is 1 chain in PDB entry 5ZHT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 54TYR 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 5ZHT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 60Right-handed alpha
Helix 2
AA2
A
81 86Right-handed 310
Helix 3
AA3
A
88 92Right-handed 310
Helix 4
AA4
A
110 114Right-handed 310
Helix 5
AA5
A
117 120Right-handed 310
Helix 6
AA6
A
121 136Right-handed alpha
Helix 7
AA7
A
147 160Right-handed alpha
Helix 8
AA8
A
187 201Right-handed alpha
Helix 9
AA9
A
201 215Right-handed alpha
Helix 10
AB1
A
218 230Right-handed alpha
Helix 11
AB2
A
233 246Right-handed alpha
Helix 12
AB3
A
249 256Right-handed 310
Helix 13
AB4
A
274 283Right-handed alpha
Helix 14
AB5
A
298 303Right-handed alpha
Helix 15
AB6
A
303 315Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 5ZHT.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
97 100anti-parallel
Strand 3
A
71 75parallel
Strand 4
A
141 146parallel
Strand 5
A
164 170parallel
Strand 6
A
260 264parallel
Strand 7
A
287 291parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il