Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZHX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZHX entry

There are 8 chains in PDB entry 5ZHX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 87	THR 555
B	ASP 87	THR 555
C	ASP 87	THR 555
D	ASP 87	THR 555
e	ALA 3	LEU 191
f	ALA 3	LEU 191
g	ALA 3	LEU 191
h	ALA 3	LEU 191

There are153 helices in PDB entry 5ZHX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	87	98	Right-handed alpha
Helix 2	AA2	A	102	115	Right-handed alpha
Helix 3	AA3	A	120	130	Right-handed alpha
Helix 4	AA4	A	132	143	Right-handed alpha
Helix 5	AA5	A	147	161	Right-handed alpha
Helix 6	AA6	A	165	173	Right-handed alpha
Helix 7	AA7	A	174	186	Right-handed alpha
Helix 8	AA8	A	188	204	Right-handed alpha
Helix 9	AA9	A	205	216	Right-handed alpha
Helix 10	AB1	A	216	228	Right-handed alpha
Helix 11	AB2	A	233	251	Right-handed alpha
Helix 12	AB3	A	253	261	Right-handed alpha
Helix 13	AB4	A	267	274	Right-handed alpha
Helix 14	AB5	A	280	295	Right-handed alpha
Helix 15	AB6	A	297	306	Right-handed alpha
Helix 16	AB7	A	308	320	Right-handed alpha
Helix 17	AB8	A	325	340	Right-handed alpha
Helix 18	AB9	A	342	353	Right-handed alpha
Helix 19	AC1	A	353	360	Right-handed alpha
Helix 20	AC2	A	366	381	Right-handed alpha
Helix 21	AC3	A	384	394	Right-handed alpha
Helix 22	AC4	A	394	406	Right-handed alpha
Helix 23	AC5	A	411	429	Right-handed alpha
Helix 24	AC6	A	430	441	Right-handed alpha
Helix 25	AC7	A	442	450	Right-handed alpha
Helix 26	AC8	A	454	484	Right-handed alpha
Helix 27	AC9	A	484	493	Right-handed alpha
Helix 28	AD1	A	500	512	Right-handed alpha
Helix 29	AD2	A	525	533	Right-handed alpha
Helix 30	AD3	A	538	554	Right-handed alpha
Helix 31	AD4	B	88	98	Right-handed alpha
Helix 32	AD5	B	102	117	Right-handed alpha
Helix 33	AD6	B	120	130	Right-handed alpha
Helix 34	AD7	B	132	143	Right-handed alpha
Helix 35	AD8	B	147	161	Right-handed alpha
Helix 36	AD9	B	165	173	Right-handed alpha
Helix 37	AE1	B	174	186	Right-handed alpha
Helix 38	AE2	B	188	204	Right-handed alpha
Helix 39	AE3	B	205	216	Right-handed alpha
Helix 40	AE4	B	216	228	Right-handed alpha
Helix 41	AE5	B	233	251	Right-handed alpha
Helix 42	AE6	B	253	261	Right-handed alpha
Helix 43	AE7	B	267	274	Right-handed alpha
Helix 44	AE8	B	280	295	Right-handed alpha
Helix 45	AE9	B	297	306	Right-handed alpha
Helix 46	AF1	B	308	320	Right-handed alpha
Helix 47	AF2	B	325	340	Right-handed alpha
Helix 48	AF3	B	342	353	Right-handed alpha
Helix 49	AF4	B	353	360	Right-handed alpha
Helix 50	AF5	B	366	381	Right-handed alpha
Helix 51	AF6	B	384	394	Right-handed alpha
Helix 52	AF7	B	394	406	Right-handed alpha
Helix 53	AF8	B	411	429	Right-handed alpha
Helix 54	AF9	B	430	441	Right-handed alpha
Helix 55	AG1	B	442	450	Right-handed alpha
Helix 56	AG2	B	454	484	Right-handed alpha
Helix 57	AG3	B	484	493	Right-handed alpha
Helix 58	AG4	B	499	502	Right-handed 310
Helix 59	AG5	B	503	512	Right-handed alpha
Helix 60	AG6	B	514	519	Right-handed alpha
Helix 61	AG7	B	525	533	Right-handed alpha
Helix 62	AG8	B	538	554	Right-handed alpha
Helix 63	AG9	C	88	98	Right-handed alpha
Helix 64	AH1	C	102	115	Right-handed alpha
Helix 65	AH2	C	120	130	Right-handed alpha
Helix 66	AH3	C	132	143	Right-handed alpha
Helix 67	AH4	C	147	161	Right-handed alpha
Helix 68	AH5	C	165	173	Right-handed alpha
Helix 69	AH6	C	174	186	Right-handed alpha
Helix 70	AH7	C	188	204	Right-handed alpha
Helix 71	AH8	C	205	216	Right-handed alpha
Helix 72	AH9	C	216	228	Right-handed alpha
Helix 73	AI1	C	233	251	Right-handed alpha
Helix 74	AI2	C	253	261	Right-handed alpha
Helix 75	AI3	C	267	274	Right-handed alpha
Helix 76	AI4	C	280	295	Right-handed alpha
Helix 77	AI5	C	297	306	Right-handed alpha
Helix 78	AI6	C	308	320	Right-handed alpha
Helix 79	AI7	C	325	340	Right-handed alpha
Helix 80	AI8	C	342	353	Right-handed alpha
Helix 81	AI9	C	353	360	Right-handed alpha
Helix 82	AJ1	C	366	381	Right-handed alpha
Helix 83	AJ2	C	384	394	Right-handed alpha
Helix 84	AJ3	C	394	406	Right-handed alpha
Helix 85	AJ4	C	411	429	Right-handed alpha
Helix 86	AJ5	C	430	441	Right-handed alpha
Helix 87	AJ6	C	442	450	Right-handed alpha
Helix 88	AJ7	C	454	484	Right-handed alpha
Helix 89	AJ8	C	484	493	Right-handed alpha
Helix 90	AJ9	C	499	502	Right-handed 310
Helix 91	AK1	C	503	512	Right-handed alpha
Helix 92	AK2	C	514	519	Right-handed alpha
Helix 93	AK3	C	525	533	Right-handed alpha
Helix 94	AK4	C	538	554	Right-handed alpha
Helix 95	AK5	D	88	98	Right-handed alpha
Helix 96	AK6	D	102	115	Right-handed alpha
Helix 97	AK7	D	120	130	Right-handed alpha
Helix 98	AK8	D	132	143	Right-handed alpha
Helix 99	AK9	D	147	161	Right-handed alpha
Helix 100	AL1	D	165	173	Right-handed alpha
Helix 101	AL2	D	174	186	Right-handed alpha
Helix 102	AL3	D	188	204	Right-handed alpha
Helix 103	AL4	D	205	216	Right-handed alpha
Helix 104	AL5	D	216	228	Right-handed alpha
Helix 105	AL6	D	233	251	Right-handed alpha
Helix 106	AL7	D	253	261	Right-handed alpha
Helix 107	AL8	D	267	274	Right-handed alpha
Helix 108	AL9	D	280	295	Right-handed alpha
Helix 109	AM1	D	297	306	Right-handed alpha
Helix 110	AM2	D	308	320	Right-handed alpha
Helix 111	AM3	D	325	340	Right-handed alpha
Helix 112	AM4	D	342	353	Right-handed alpha
Helix 113	AM5	D	353	360	Right-handed alpha
Helix 114	AM6	D	366	381	Right-handed alpha
Helix 115	AM7	D	384	394	Right-handed alpha
Helix 116	AM8	D	394	406	Right-handed alpha
Helix 117	AM9	D	411	429	Right-handed alpha
Helix 118	AN1	D	430	441	Right-handed alpha
Helix 119	AN2	D	442	450	Right-handed alpha
Helix 120	AN3	D	454	484	Right-handed alpha
Helix 121	AN4	D	484	493	Right-handed alpha
Helix 122	AN5	D	503	512	Right-handed alpha
Helix 123	AN6	D	525	533	Right-handed alpha
Helix 124	AN7	D	538	554	Right-handed alpha
Helix 125	AN8	e	18	24	Right-handed alpha
Helix 126	AN9	e	88	94	Right-handed alpha
Helix 127	AO1	e	94	99	Right-handed alpha
Helix 128	AO2	e	99	107	Right-handed alpha
Helix 129	AO3	e	126	133	Right-handed alpha
Helix 130	AO4	e	140	152	Right-handed alpha
Helix 131	AO5	e	166	180	Right-handed alpha
Helix 132	AO6	f	88	94	Right-handed alpha
Helix 133	AO7	f	94	99	Right-handed alpha
Helix 134	AO8	f	99	107	Right-handed alpha
Helix 135	AO9	f	126	133	Right-handed alpha
Helix 136	AP1	f	140	152	Right-handed alpha
Helix 137	AP2	f	167	181	Right-handed alpha
Helix 138	AP3	g	88	94	Right-handed alpha
Helix 139	AP4	g	94	99	Right-handed alpha
Helix 140	AP5	g	99	107	Right-handed alpha
Helix 141	AP6	g	118	122	Right-handed 310
Helix 142	AP7	g	126	133	Right-handed alpha
Helix 143	AP8	g	140	152	Right-handed alpha
Helix 144	AP9	g	166	181	Right-handed alpha
Helix 145	AQ1	g	182	184	Right-handed 310
Helix 146	AQ2	h	18	24	Right-handed alpha
Helix 147	AQ3	h	88	94	Right-handed alpha
Helix 148	AQ4	h	94	99	Right-handed alpha
Helix 149	AQ5	h	99	107	Right-handed alpha
Helix 150	AQ6	h	118	122	Right-handed 310
Helix 151	AQ7	h	126	133	Right-handed alpha
Helix 152	AQ8	h	140	152	Right-handed alpha
Helix 153	AQ9	h	166	180	Right-handed alpha

There are 4 sheets in PDB entry 5ZHX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	43	44	first strand
Strand 2	e	53	57	anti-parallel
Strand 3	e	4	12	parallel
Strand 4	e	79	85	parallel
Strand 5	e	112	117	parallel
Strand 6	e	155	158	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	45	47	first strand
Strand 2	f	52	56	anti-parallel
Strand 3	f	4	11	parallel
Strand 4	f	79	85	parallel
Strand 5	f	112	117	parallel
Strand 6	f	155	158	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	46	47	first strand
Strand 2	g	52	56	anti-parallel
Strand 3	g	4	11	parallel
Strand 4	g	79	85	parallel
Strand 5	g	112	117	parallel
Strand 6	g	155	158	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	43	44	first strand
Strand 2	h	53	57	anti-parallel
Strand 3	h	4	12	parallel
Strand 4	h	79	85	parallel
Strand 5	h	112	117	parallel
Strand 6	h	155	158	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZHX

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZHX