Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZI2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZI2 entry

There are 2 chains in PDB entry 5ZI2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 339
B
 MET 1ASP 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 5ZI2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 24Right-handed alpha
Helix 2
AA2
A
37 47Right-handed alpha
Helix 3
AA3
A
61 67Right-handed alpha
Helix 4
AA4
A
85 108Right-handed alpha
Helix 5
AA5
A
119 134Right-handed alpha
Helix 6
AA6
A
138 140Right-handed 310
Helix 7
AA7
A
146 165Right-handed alpha
Helix 8
AA8
A
165 171Right-handed alpha
Helix 9
AA9
A
173 179Right-handed 310
Helix 10
AB1
A
188 190Right-handed 310
Helix 11
AB2
A
198 206Right-handed alpha
Helix 12
AB3
A
208 218Right-handed alpha
Helix 13
AB4
A
218 227Right-handed alpha
Helix 14
AB5
A
234 251Right-handed alpha
Helix 15
AB6
A
252 254Right-handed 310
Helix 16
AB7
A
269 271Right-handed 310
Helix 17
AB8
A
273 281Right-handed alpha
Helix 18
AB9
A
305 310Right-handed alpha
Helix 19
AC1
A
312 339Right-handed alpha
Helix 20
AC2
B
13 23Right-handed alpha
Helix 21
AC3
B
37 47Right-handed alpha
Helix 22
AC4
B
61 67Right-handed alpha
Helix 23
AC5
B
85 108Right-handed alpha
Helix 24
AC6
B
119 134Right-handed alpha
Helix 25
AC7
B
138 140Right-handed 310
Helix 26
AC8
B
146 165Right-handed alpha
Helix 27
AC9
B
165 171Right-handed alpha
Helix 28
AD1
B
172 179Right-handed 310
Helix 29
AD2
B
188 190Right-handed 310
Helix 30
AD3
B
198 206Right-handed alpha
Helix 31
AD4
B
208 218Right-handed alpha
Helix 32
AD5
B
218 227Right-handed alpha
Helix 33
AD6
B
234 252Right-handed alpha
Helix 34
AD7
B
269 271Right-handed 310
Helix 35
AD8
B
273 281Right-handed alpha
Helix 36
AD9
B
305 310Right-handed alpha
Helix 37
AE1
B
312 339Right-handed alpha
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There are 6 sheets in PDB entry 5ZI2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
27 33parallel
Strand 3
A
2 7parallel
Strand 4
A
71 74parallel
Strand 5
A
112 115parallel
Strand 6
A
142 144parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 185first strand
Strand 2
A
192 196anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 267first strand
Strand 2
A
288 296anti-parallel
Strand 3
A
299 303anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 57first strand
Strand 2
B
27 33parallel
Strand 3
B
2 7parallel
Strand 4
B
71 74parallel
Strand 5
B
112 115parallel
Strand 6
B
142 144parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 185first strand
Strand 2
B
192 196anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
263 267first strand
Strand 2
B
288 296anti-parallel
Strand 3
B
299 303anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il