Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZIB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZIB entry

There is 1 chain in PDB entry 5ZIB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 128LEU 741
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5ZIB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
128 140Right-handed alpha
Helix 2
AA2
A
155 167Right-handed alpha
Helix 3
AA3
A
171 176Right-handed alpha
Helix 4
AA4
A
181 192Right-handed alpha
Helix 5
AA5
A
222 230Right-handed alpha
Helix 6
AA6
A
235 260Right-handed alpha
Helix 7
AA7
A
275 278Right-handed 310
Helix 8
AA8
A
296 311Right-handed alpha
Helix 9
AA9
A
320 328Right-handed alpha
Helix 10
AB1
A
353 364Right-handed alpha
Helix 11
AB2
A
365 372Right-handed 310
Helix 12
AB3
A
383 388Right-handed alpha
Helix 13
AB4
A
388 395Right-handed alpha
Helix 14
AB5
A
407 409Right-handed 310
Helix 15
AB6
A
433 441Right-handed alpha
Helix 16
AB7
A
455 460Right-handed 310
Helix 17
AB8
A
462 471Right-handed alpha
Helix 18
AB9
A
498 508Right-handed alpha
Helix 19
AC1
A
522 530Right-handed alpha
Helix 20
AC2
A
548 552Right-handed 310
Helix 21
AC3
A
564 571Right-handed alpha
Helix 22
AC4
A
583 596Right-handed alpha
Helix 23
AC5
A
604 607Right-handed 310
Helix 24
AC6
A
608 623Right-handed alpha
Helix 25
AC7
A
634 636Right-handed 310
Helix 26
AC8
A
648 655Right-handed alpha
Helix 27
AC9
A
662 668Right-handed 310
Helix 28
AD1
A
670 676Right-handed alpha
Helix 29
AD2
A
707 711Right-handed 310
Helix 30
AD3
A
737 741Right-handed 310
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There are 5 sheets in PDB entry 5ZIB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 318first strand
Strand 2
A
269 273parallel
Strand 3
A
348 352parallel
Strand 4
A
374 377parallel
Strand 5
A
411 413parallel
Strand 6
A
422 423parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 493first strand
Strand 2
A
474 477parallel
Strand 3
A
448 451parallel
Strand 4
A
511 513parallel
Strand 5
A
533 543parallel
Strand 6
A
560 562anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 493first strand
Strand 2
A
474 477parallel
Strand 3
A
448 451parallel
Strand 4
A
511 513parallel
Strand 5
A
533 543parallel
Strand 6
A
576 579parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 643first strand
Strand 2
A
721 727anti-parallel
Strand 3
A
659 660anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 643first strand
Strand 2
A
721 727anti-parallel
Strand 3
A
694 696anti-parallel
Strand 4
A
701 705anti-parallel
Strand 5
A
683 687parallel
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