Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZIC entry

There are 2 chains in PDB entry 5ZIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 214LEU 741
B
 SER 214LEU 741
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 5ZIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
222 231Right-handed alpha
Helix 2
AA2
A
232 234Right-handed 310
Helix 3
AA3
A
235 245Right-handed alpha
Helix 4
AA4
A
245 260Right-handed alpha
Helix 5
AA5
A
275 282Right-handed 310
Helix 6
AA6
A
298 311Right-handed alpha
Helix 7
AA7
A
320 328Right-handed alpha
Helix 8
AA8
A
353 364Right-handed alpha
Helix 9
AA9
A
365 372Right-handed 310
Helix 10
AB1
A
383 388Right-handed alpha
Helix 11
AB2
A
388 396Right-handed alpha
Helix 12
AB3
A
407 409Right-handed 310
Helix 13
AB4
A
455 460Right-handed 310
Helix 14
AB5
A
462 473Right-handed alpha
Helix 15
AB6
A
498 508Right-handed alpha
Helix 16
AB7
A
522 530Right-handed alpha
Helix 17
AB8
A
548 552Right-handed 310
Helix 18
AB9
A
564 571Right-handed alpha
Helix 19
AC1
A
583 597Right-handed alpha
Helix 20
AC2
A
604 607Right-handed 310
Helix 21
AC3
A
608 623Right-handed alpha
Helix 22
AC4
A
634 638Right-handed 310
Helix 23
AC5
A
648 655Right-handed alpha
Helix 24
AC6
A
662 668Right-handed 310
Helix 25
AC7
A
670 676Right-handed alpha
Helix 26
AC8
A
707 711Right-handed 310
Helix 27
AC9
B
222 229Right-handed alpha
Helix 28
AD1
B
235 260Right-handed alpha
Helix 29
AD2
B
284 292Right-handed alpha
Helix 30
AD3
B
295 311Right-handed alpha
Helix 31
AD4
B
320 328Right-handed alpha
Helix 32
AD5
B
353 364Right-handed alpha
Helix 33
AD6
B
365 372Right-handed 310
Helix 34
AD7
B
383 388Right-handed alpha
Helix 35
AD8
B
388 395Right-handed alpha
Helix 36
AD9
B
407 409Right-handed 310
Helix 37
AE1
B
455 460Right-handed 310
Helix 38
AE2
B
462 471Right-handed alpha
Helix 39
AE3
B
498 509Right-handed alpha
Helix 40
AE4
B
522 530Right-handed alpha
Helix 41
AE5
B
564 571Right-handed alpha
Helix 42
AE6
B
583 596Right-handed alpha
Helix 43
AE7
B
604 607Right-handed 310
Helix 44
AE8
B
608 623Right-handed alpha
Helix 45
AE9
B
634 636Right-handed 310
Helix 46
AF1
B
648 655Right-handed alpha
Helix 47
AF2
B
662 668Right-handed 310
Helix 48
AF3
B
670 676Right-handed alpha
Helix 49
AF4
B
707 711Right-handed 310
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There are 10 sheets in PDB entry 5ZIC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 318first strand
Strand 2
A
269 273parallel
Strand 3
A
348 352parallel
Strand 4
A
374 377parallel
Strand 5
A
411 413parallel
Strand 6
A
422 423parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 493first strand
Strand 2
A
474 477parallel
Strand 3
A
446 451parallel
Strand 4
A
509 513parallel
Strand 5
A
533 543parallel
Strand 6
A
560 562anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 493first strand
Strand 2
A
474 477parallel
Strand 3
A
446 451parallel
Strand 4
A
509 513parallel
Strand 5
A
533 543parallel
Strand 6
A
576 579parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
639 643first strand
Strand 2
A
721 727anti-parallel
Strand 3
A
659 660anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
639 643first strand
Strand 2
A
721 727anti-parallel
Strand 3
A
694 695anti-parallel
Strand 4
A
702 705anti-parallel
Strand 5
A
684 687parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
314 318first strand
Strand 2
B
269 273parallel
Strand 3
B
348 352parallel
Strand 4
B
374 377parallel
Strand 5
B
411 413parallel
Strand 6
B
422 423parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
492 493first strand
Strand 2
B
474 477parallel
Strand 3
B
448 452parallel
Strand 4
B
511 514parallel
Strand 5
B
533 543parallel
Strand 6
B
560 562anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
492 493first strand
Strand 2
B
474 477parallel
Strand 3
B
448 452parallel
Strand 4
B
511 514parallel
Strand 5
B
533 543parallel
Strand 6
B
576 579parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
638 643first strand
Strand 2
B
721 727anti-parallel
Strand 3
B
659 660anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
638 643first strand
Strand 2
B
721 727anti-parallel
Strand 3
B
694 696anti-parallel
Strand 4
B
701 705anti-parallel
Strand 5
B
683 687parallel
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