Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZIG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZIG entry

There are 4 chains in PDB entry 5ZIG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 404
B	MET 1	GLU 404
C	PRO 4	GLU 402
D	THR 5	HIS 25

There are 52 helices in PDB entry 5ZIG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	25	Right-handed alpha
Helix 2	AA2	A	25	32	Right-handed alpha
Helix 3	AA3	A	57	74	Right-handed alpha
Helix 4	AA4	A	76	93	Right-handed alpha
Helix 5	AA5	A	119	137	Right-handed alpha
Helix 6	AA6	A	138	155	Right-handed alpha
Helix 7	AA7	A	191	209	Right-handed alpha
Helix 8	AA8	A	210	227	Right-handed alpha
Helix 9	AA9	A	251	270	Right-handed alpha
Helix 10	AB1	A	274	295	Right-handed alpha
Helix 11	AB2	A	315	333	Right-handed alpha
Helix 12	AB3	A	335	352	Right-handed alpha
Helix 13	AB4	A	383	403	Right-handed alpha
Helix 14	AB5	B	6	25	Right-handed alpha
Helix 15	AB6	B	25	32	Right-handed alpha
Helix 16	AB7	B	57	74	Right-handed alpha
Helix 17	AB8	B	76	93	Right-handed alpha
Helix 18	AB9	B	119	137	Right-handed alpha
Helix 19	AC1	B	138	155	Right-handed alpha
Helix 20	AC2	B	191	209	Right-handed alpha
Helix 21	AC3	B	210	227	Right-handed alpha
Helix 22	AC4	B	251	270	Right-handed alpha
Helix 23	AC5	B	274	295	Right-handed alpha
Helix 24	AC6	B	315	333	Right-handed alpha
Helix 25	AC7	B	334	352	Right-handed alpha
Helix 26	AC8	B	383	404	Right-handed alpha
Helix 27	AC9	C	7	25	Right-handed alpha
Helix 28	AD1	C	25	32	Right-handed alpha
Helix 29	AD2	C	57	74	Right-handed alpha
Helix 30	AD3	C	76	93	Right-handed alpha
Helix 31	AD4	C	119	137	Right-handed alpha
Helix 32	AD5	C	138	155	Right-handed alpha
Helix 33	AD6	C	191	209	Right-handed alpha
Helix 34	AD7	C	210	227	Right-handed alpha
Helix 35	AD8	C	251	270	Right-handed alpha
Helix 36	AD9	C	274	295	Right-handed alpha
Helix 37	AE1	C	315	333	Right-handed alpha
Helix 38	AE2	C	335	352	Right-handed alpha
Helix 39	AE3	C	383	400	Right-handed alpha
Helix 40	AE4	D	7	25	Right-handed alpha
Helix 41	AE5	D	25	32	Right-handed alpha
Helix 42	AE6	D	57	74	Right-handed alpha
Helix 43	AE7	D	76	93	Right-handed alpha
Helix 44	AE8	D	119	137	Right-handed alpha
Helix 45	AE9	D	138	155	Right-handed alpha
Helix 46	AF1	D	191	209	Right-handed alpha
Helix 47	AF2	D	210	227	Right-handed alpha
Helix 48	AF3	D	251	270	Right-handed alpha
Helix 49	AF4	D	274	295	Right-handed alpha
Helix 50	AF5	D	315	333	Right-handed alpha
Helix 51	AF6	D	334	352	Right-handed alpha
Helix 52	AF7	D	383	402	Right-handed alpha

There are 21 sheets in PDB entry 5ZIG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	45	first strand
Strand 2	A	49	50	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	105	106	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	118	first strand
Strand 2	A	167	168	anti-parallel
Strand 3	A	175	176	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	190	first strand
Strand 2	A	237	238	anti-parallel
Strand 3	A	244	245	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	250	first strand
Strand 2	A	302	303	anti-parallel
Strand 3	A	309	310	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	314	first strand
Strand 2	A	363	364	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	56	first strand
Strand 2	B	105	106	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	118	first strand
Strand 2	B	167	168	anti-parallel
Strand 3	B	175	176	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	190	first strand
Strand 2	B	237	238	anti-parallel
Strand 3	B	244	245	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	249	250	first strand
Strand 2	B	302	303	anti-parallel
Strand 3	B	309	310	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	314	first strand
Strand 2	B	363	364	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	56	first strand
Strand 2	C	105	106	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	118	first strand
Strand 2	C	167	168	anti-parallel
Strand 3	C	175	176	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	190	first strand
Strand 2	C	237	238	anti-parallel
Strand 3	C	244	245	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	249	250	first strand
Strand 2	C	302	303	anti-parallel
Strand 3	C	309	310	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	314	first strand
Strand 2	C	363	364	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	55	56	first strand
Strand 2	D	105	106	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	118	first strand
Strand 2	D	167	168	anti-parallel
Strand 3	D	175	176	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	190	first strand
Strand 2	D	237	238	anti-parallel
Strand 3	D	244	245	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	249	250	first strand
Strand 2	D	302	303	anti-parallel
Strand 3	D	309	310	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	314	first strand
Strand 2	D	363	364	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZIG

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZIG