Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZIO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZIO entry

There is 1 chain in PDB entry 5ZIO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 16ARG 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5ZIO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
67 82Right-handed alpha
Helix 2
AA2
A
95 100Right-handed alpha
Helix 3
AA3
A
101 108Right-handed alpha
Helix 4
AA4
A
116 122Right-handed alpha
Helix 5
AA5
A
143 147Right-handed 310
Helix 6
AA6
A
180 183Right-handed 310
Helix 7
AA7
A
201 213Right-handed alpha
Helix 8
AA8
A
229 241Right-handed alpha
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There are 2 sheets in PDB entry 5ZIO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
22 28anti-parallel
Strand 3
A
31 40anti-parallel
Strand 4
A
44 55anti-parallel
Strand 5
A
58 62anti-parallel
Strand 6
A
86 91parallel
Strand 7
A
111 115parallel
Strand 8
A
132 134parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 156first strand
Strand 2
A
168 171anti-parallel
Strand 3
A
176 178anti-parallel
Strand 4
A
218 220parallel
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