Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZIX entry

There are 3 chains in PDB entry 5ZIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 303
B
 MET 1ARG 303
C
 MET 1ARG 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5ZIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 22Right-handed alpha
Helix 2
AA2
A
32 41Right-handed alpha
Helix 3
AA3
A
77 79Right-handed 310
Helix 4
AA4
A
80 87Right-handed alpha
Helix 5
AA5
A
106 115Right-handed alpha
Helix 6
AA6
A
158 165Right-handed alpha
Helix 7
AA7
A
174 197Right-handed alpha
Helix 8
AA8
A
199 205Right-handed 310
Helix 9
AA9
A
206 224Right-handed alpha
Helix 10
AB1
A
226 244Right-handed alpha
Helix 11
AB2
A
249 257Right-handed alpha
Helix 12
AB3
A
262 265Right-handed 310
Helix 13
AB4
A
266 277Right-handed alpha
Helix 14
AB5
A
281 298Right-handed alpha
Helix 15
AB6
B
9 22Right-handed alpha
Helix 16
AB7
B
32 43Right-handed alpha
Helix 17
AB8
B
77 79Right-handed 310
Helix 18
AB9
B
80 88Right-handed alpha
Helix 19
AC1
B
106 115Right-handed alpha
Helix 20
AC2
B
158 165Right-handed alpha
Helix 21
AC3
B
174 197Right-handed alpha
Helix 22
AC4
B
199 205Right-handed 310
Helix 23
AC5
B
206 224Right-handed alpha
Helix 24
AC6
B
226 244Right-handed alpha
Helix 25
AC7
B
249 257Right-handed alpha
Helix 26
AC8
B
262 265Right-handed 310
Helix 27
AC9
B
266 277Right-handed alpha
Helix 28
AD1
B
281 297Right-handed alpha
Helix 29
AD2
C
9 22Right-handed alpha
Helix 30
AD3
C
32 43Right-handed alpha
Helix 31
AD4
C
77 85Right-handed alpha
Helix 32
AD5
C
88 90Right-handed 310
Helix 33
AD6
C
106 115Right-handed alpha
Helix 34
AD7
C
158 165Right-handed alpha
Helix 35
AD8
C
174 197Right-handed alpha
Helix 36
AD9
C
199 205Right-handed 310
Helix 37
AE1
C
206 225Right-handed alpha
Helix 38
AE2
C
226 232Right-handed alpha
Helix 39
AE3
C
232 242Right-handed alpha
Helix 40
AE4
C
249 257Right-handed alpha
Helix 41
AE5
C
266 277Right-handed alpha
Helix 42
AE6
C
281 286Right-handed alpha
Helix 43
AE7
C
286 298Right-handed alpha
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There are 6 sheets in PDB entry 5ZIX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
26 29parallel
Strand 3
A
3 6parallel
Strand 4
A
69 74parallel
Strand 5
A
92 100parallel
Strand 6
A
119 125parallel
Strand 7
A
145 148anti-parallel
Strand 8
A
169 171parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 56first strand
Strand 2
A
45 49anti-parallel
Strand 3
A
136 141parallel
Strand 4
A
128 131anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 61first strand
Strand 2
B
26 29parallel
Strand 3
B
3 6parallel
Strand 4
B
69 74parallel
Strand 5
B
92 100parallel
Strand 6
B
119 125parallel
Strand 7
B
145 148anti-parallel
Strand 8
B
169 171parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 56first strand
Strand 2
B
45 49anti-parallel
Strand 3
B
136 141parallel
Strand 4
B
128 131anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 61first strand
Strand 2
C
26 29parallel
Strand 3
C
3 6parallel
Strand 4
C
69 74parallel
Strand 5
C
92 100parallel
Strand 6
C
119 125parallel
Strand 7
C
145 148anti-parallel
Strand 8
C
170 171parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 56first strand
Strand 2
C
45 49anti-parallel
Strand 3
C
136 139parallel
Strand 4
C
129 131anti-parallel
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