Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZJB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZJB entry

There are 2 chains in PDB entry 5ZJB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3CYS 234
B
 LYS 3CYS 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5ZJB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 16Right-handed alpha
Helix 2
AA2
A
33 48Right-handed alpha
Helix 3
AA3
A
56 67Right-handed alpha
Helix 4
AA4
A
89 100Right-handed alpha
Helix 5
AA5
A
116 127Right-handed alpha
Helix 6
AA6
A
137 147Right-handed alpha
Helix 7
AA7
A
169 179Right-handed alpha
Helix 8
AA8
A
191 201Right-handed alpha
Helix 9
AA9
A
209 214Right-handed alpha
Helix 10
AB1
A
214 234Right-handed alpha
Helix 11
AB2
B
7 16Right-handed alpha
Helix 12
AB3
B
33 48Right-handed alpha
Helix 13
AB4
B
56 67Right-handed alpha
Helix 14
AB5
B
89 100Right-handed alpha
Helix 15
AB6
B
116 128Right-handed alpha
Helix 16
AB7
B
137 147Right-handed alpha
Helix 17
AB8
B
169 179Right-handed alpha
Helix 18
AB9
B
191 201Right-handed alpha
Helix 19
AC1
B
209 214Right-handed alpha
Helix 20
AC2
B
214 234Right-handed alpha
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There are 2 sheets in PDB entry 5ZJB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 23first strand
Strand 2
A
52 55parallel
Strand 3
A
71 74parallel
Strand 4
A
103 107parallel
Strand 5
A
130 134parallel
Strand 6
A
151 153parallel
Strand 7
A
182 186parallel
Strand 8
A
205 208parallel
Strand 9
A
19 23parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 23first strand
Strand 2
B
52 55parallel
Strand 3
B
71 74parallel
Strand 4
B
103 107parallel
Strand 5
B
130 134parallel
Strand 6
B
151 153parallel
Strand 7
B
183 186parallel
Strand 8
B
205 208parallel
Strand 9
B
19 23parallel
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