Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZKN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZKN entry

There is 1 chain in PDB entry 5ZKN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 0LYS 224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5ZKN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 7Right-handed alpha
Helix 2
AA2
A
26 41Right-handed alpha
Helix 3
AA3
A
49 60Right-handed alpha
Helix 4
AA4
A
82 93Right-handed alpha
Helix 5
AA5
A
111 123Right-handed alpha
Helix 6
AA6
A
134 144Right-handed alpha
Helix 7
AA7
A
157 161Right-handed 310
Helix 8
AA8
A
164 176Right-handed alpha
Helix 9
AA9
A
188 199Right-handed alpha
Helix 10
AB1
A
206 211Right-handed alpha
Helix 11
AB2
A
211 223Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5ZKN.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 16first strand
Strand 2
A
44 48parallel
Strand 3
A
64 67parallel
Strand 4
A
96 100parallel
Strand 5
A
127 131parallel
Strand 6
A
148 150parallel
Strand 7
A
180 183parallel
Strand 8
A
202 205parallel
Strand 9
A
12 16parallel
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