Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZL1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZL1 entry

There are 4 chains in PDB entry 5ZL1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 21	LYS 326
B	MET 21	LYS 326
C	MET 21	LYS 326
D	MET 21	LYS 326

There are 19 helices in PDB entry 5ZL1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	149	152	Right-handed 310
Helix 2	AA2	A	153	160	Right-handed alpha
Helix 3	AA3	A	206	212	Right-handed alpha
Helix 4	AA4	A	311	315	Right-handed 310
Helix 5	AA5	B	149	152	Right-handed 310
Helix 6	AA6	B	153	160	Right-handed alpha
Helix 7	AA7	B	197	201	Right-handed 310
Helix 8	AA8	B	206	212	Right-handed alpha
Helix 9	AA9	B	229	233	Right-handed 310
Helix 10	AB1	B	313	318	Right-handed alpha
Helix 11	AB2	C	149	152	Right-handed 310
Helix 12	AB3	C	153	160	Right-handed alpha
Helix 13	AB4	C	206	212	Right-handed alpha
Helix 14	AB5	C	311	315	Right-handed 310
Helix 15	AB6	D	149	152	Right-handed 310
Helix 16	AB7	D	153	160	Right-handed alpha
Helix 17	AB8	D	197	201	Right-handed 310
Helix 18	AB9	D	206	212	Right-handed alpha
Helix 19	AC1	D	311	315	Right-handed 310

There are 20 sheets in PDB entry 5ZL1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	83	first strand
Strand 2	A	64	74	anti-parallel
Strand 3	A	46	61	anti-parallel
Strand 4	A	96	103	parallel
Strand 5	A	131	137	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	92	first strand
Strand 2	A	163	169	parallel
Strand 3	A	142	147	anti-parallel
Strand 4	A	114	115	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	220	first strand
Strand 2	A	179	188	anti-parallel
Strand 3	A	244	253	parallel
Strand 4	A	291	298	anti-parallel
Strand 5	A	269	271	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	192	first strand
Strand 2	A	203	205	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	239	first strand
Strand 2	A	320	325	parallel
Strand 3	A	303	309	anti-parallel
Strand 4	A	258	262	anti-parallel
Strand 5	A	285	287	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	82	83	first strand
Strand 2	B	64	74	anti-parallel
Strand 3	B	46	61	anti-parallel
Strand 4	B	96	103	parallel
Strand 5	B	131	137	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	92	first strand
Strand 2	B	163	169	parallel
Strand 3	B	142	147	anti-parallel
Strand 4	B	114	115	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	217	220	first strand
Strand 2	B	179	188	anti-parallel
Strand 3	B	244	253	parallel
Strand 4	B	291	298	anti-parallel
Strand 5	B	269	271	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	192	first strand
Strand 2	B	203	205	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	239	first strand
Strand 2	B	320	325	parallel
Strand 3	B	303	309	anti-parallel
Strand 4	B	258	262	anti-parallel
Strand 5	B	285	287	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	83	first strand
Strand 2	C	64	73	anti-parallel
Strand 3	C	46	61	anti-parallel
Strand 4	C	96	103	parallel
Strand 5	C	131	137	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	92	first strand
Strand 2	C	163	169	parallel
Strand 3	C	142	147	anti-parallel
Strand 4	C	114	115	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	217	220	first strand
Strand 2	C	179	188	anti-parallel
Strand 3	C	244	253	parallel
Strand 4	C	291	298	anti-parallel
Strand 5	C	269	271	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	190	192	first strand
Strand 2	C	203	205	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	239	first strand
Strand 2	C	320	325	parallel
Strand 3	C	303	309	anti-parallel
Strand 4	C	258	262	anti-parallel
Strand 5	C	285	287	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	82	83	first strand
Strand 2	D	64	74	anti-parallel
Strand 3	D	46	61	anti-parallel
Strand 4	D	96	103	parallel
Strand 5	D	131	137	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	92	first strand
Strand 2	D	163	169	parallel
Strand 3	D	142	147	anti-parallel
Strand 4	D	114	115	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	217	220	first strand
Strand 2	D	179	188	anti-parallel
Strand 3	D	244	253	parallel
Strand 4	D	291	298	anti-parallel
Strand 5	D	269	271	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	190	191	first strand
Strand 2	D	204	205	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	238	239	first strand
Strand 2	D	320	325	parallel
Strand 3	D	303	309	anti-parallel
Strand 4	D	258	262	anti-parallel
Strand 5	D	285	287	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZL1

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZL1