Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZLR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZLR entry

There are 2 chains in PDB entry 5ZLR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 379
B
 MET 1LEU 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5ZLR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 27Right-handed alpha
Helix 2
AA2
A
39 47Right-handed 310
Helix 3
AA3
A
48 55Right-handed alpha
Helix 4
AA4
A
71 93Right-handed alpha
Helix 5
AA5
A
104 118Right-handed alpha
Helix 6
AA6
A
134 145Right-handed alpha
Helix 7
AA7
A
153 163Right-handed alpha
Helix 8
AA8
A
166 168Right-handed 310
Helix 9
AA9
A
175 177Right-handed 310
Helix 10
AB1
A
178 184Right-handed alpha
Helix 11
AB2
A
188 197Right-handed alpha
Helix 12
AB3
A
220 229Right-handed alpha
Helix 13
AB4
A
246 260Right-handed alpha
Helix 14
AB5
A
271 281Right-handed alpha
Helix 15
AB6
A
289 293Right-handed 310
Helix 16
AB7
A
294 299Right-handed alpha
Helix 17
AB8
A
325 335Right-handed alpha
Helix 18
AB9
A
355 367Right-handed alpha
Helix 19
AC1
B
10 27Right-handed alpha
Helix 20
AC2
B
39 47Right-handed 310
Helix 21
AC3
B
48 55Right-handed alpha
Helix 22
AC4
B
71 94Right-handed alpha
Helix 23
AC5
B
104 117Right-handed alpha
Helix 24
AC6
B
134 145Right-handed alpha
Helix 25
AC7
B
153 163Right-handed alpha
Helix 26
AC8
B
166 168Right-handed 310
Helix 27
AC9
B
175 177Right-handed 310
Helix 28
AD1
B
178 184Right-handed alpha
Helix 29
AD2
B
188 197Right-handed alpha
Helix 30
AD3
B
220 230Right-handed alpha
Helix 31
AD4
B
245 260Right-handed alpha
Helix 32
AD5
B
271 281Right-handed alpha
Helix 33
AD6
B
289 293Right-handed 310
Helix 34
AD7
B
294 299Right-handed alpha
Helix 35
AD8
B
325 339Right-handed alpha
Helix 36
AD9
B
355 367Right-handed alpha
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There are 4 sheets in PDB entry 5ZLR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
30 37parallel
Strand 3
A
2 8parallel
Strand 4
A
97 101parallel
Strand 5
A
121 124parallel
Strand 6
A
148 151parallel
Strand 7
A
170 172parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 266first strand
Strand 2
A
234 237parallel
Strand 3
A
204 208parallel
Strand 4
A
285 287parallel
Strand 5
A
303 306parallel
Strand 6
A
319 322parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
30 37parallel
Strand 3
B
2 8parallel
Strand 4
B
97 101parallel
Strand 5
B
121 124parallel
Strand 6
B
148 151parallel
Strand 7
B
170 172parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 267first strand
Strand 2
B
234 238parallel
Strand 3
B
204 208parallel
Strand 4
B
285 287parallel
Strand 5
B
303 306parallel
Strand 6
B
319 322parallel
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