Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZLZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZLZ entry

There are 2 chains in PDB entry 5ZLZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
I
 SER 6PRO 379
E
 ILE 16ARG 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5ZLZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
I
8 28Right-handed alpha
Helix 2
AA2
I
35 48Right-handed alpha
Helix 3
AA3
I
51 63Right-handed alpha
Helix 4
AA4
I
71 82Right-handed alpha
Helix 5
AA5
I
109 118Right-handed alpha
Helix 6
AA6
I
128 142Right-handed alpha
Helix 7
AA7
I
153 157Right-handed 310
Helix 8
AA8
I
229 231Right-handed 310
Helix 9
AA9
I
246 252Right-handed alpha
Helix 10
AB1
I
255 263Right-handed alpha
Helix 11
AB2
I
286 292Right-handed alpha
Helix 12
AB3
I
295 299Right-handed 310
Helix 13
AB4
E
55 60Right-handed 310
Helix 14
AB5
E
60 62Right-handed 310
Helix 15
AB6
E
169 172Right-handed 310
Helix 16
AB7
E
234 241Right-handed alpha
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There are 5 sheets in PDB entry 5ZLZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
122 123first strand
Strand 2
I
94 99parallel
Strand 3
I
163 171anti-parallel
Strand 4
I
319 328parallel
Strand 5
I
278 285anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
185 190first strand
Strand 2
I
196 211anti-parallel
Strand 3
I
267 276anti-parallel
Strand 4
I
350 353parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
185 190first strand
Strand 2
I
196 211anti-parallel
Strand 3
I
221 227anti-parallel
Strand 4
I
233 240anti-parallel
Strand 5
I
358 364anti-parallel
Strand 6
I
370 376anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
20 21first strand
Strand 2
E
156 162anti-parallel
Strand 3
E
180 184anti-parallel
Strand 4
E
226 230anti-parallel
Strand 5
E
206 215anti-parallel
Strand 6
E
198 203anti-parallel
Strand 7
E
135 140anti-parallel
Strand 8
E
156 162anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
81 82first strand
Strand 2
E
64 68anti-parallel
Strand 3
E
30 36anti-parallel
Strand 4
E
38 46anti-parallel
Strand 5
E
51 54anti-parallel
Strand 6
E
104 108anti-parallel
Strand 7
E
85 90anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il