Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZMF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZMF entry

There is 1 chain in PDB entry 5ZMF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 91TRP 776
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5ZMF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 129Right-handed alpha
Helix 2
AA2
A
142 147Right-handed alpha
Helix 3
AA3
A
174 183Right-handed alpha
Helix 4
AA4
A
204 209Right-handed alpha
Helix 5
AA5
A
211 220Right-handed alpha
Helix 6
AA6
A
222 229Right-handed alpha
Helix 7
AA7
A
233 250Right-handed alpha
Helix 8
AA8
A
273 291Right-handed alpha
Helix 9
AA9
A
298 303Right-handed alpha
Helix 10
AB1
A
309 331Right-handed alpha
Helix 11
AB2
A
345 362Right-handed alpha
Helix 12
AB3
A
379 401Right-handed alpha
Helix 13
AB4
A
421 433Right-handed alpha
Helix 14
AB5
A
438 442Right-handed 310
Helix 15
AB6
A
458 472Right-handed alpha
Helix 16
AB7
A
486 492Right-handed alpha
Helix 17
AB8
A
520 532Right-handed alpha
Helix 18
AB9
A
544 549Right-handed alpha
Helix 19
AC1
A
554 561Right-handed alpha
Helix 20
AC2
A
571 584Right-handed alpha
Helix 21
AC3
A
611 631Right-handed alpha
Helix 22
AC4
A
632 634Right-handed 310
Helix 23
AC5
A
653 671Right-handed alpha
Helix 24
AC6
A
685 702Right-handed alpha
Helix 25
AC7
A
716 718Right-handed 310
Helix 26
AC8
A
719 740Right-handed alpha
Helix 27
AC9
A
764 776Right-handed alpha
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There are 2 sheets in PDB entry 5ZMF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
167 171anti-parallel
Strand 3
A
133 137parallel
Strand 4
A
257 261parallel
Strand 5
A
103 109parallel
Strand 6
A
336 342parallel
Strand 7
A
366 374parallel
Strand 8
A
752 756parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 413first strand
Strand 2
A
706 714parallel
Strand 3
A
676 682parallel
Strand 4
A
447 452parallel
Strand 5
A
595 599parallel
Strand 6
A
477 481parallel
Strand 7
A
514 518parallel
Strand 8
A
502 503anti-parallel
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