Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZMP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZMP entry

There is 1 chain in PDB entry 5ZMP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5ZMP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 13Right-handed 310
Helix 2
AA2
A
23 36Right-handed alpha
Helix 3
AA3
A
38 40Right-handed 310
Helix 4
AA4
A
55 63Right-handed alpha
Helix 5
AA5
A
64 77Right-handed alpha
Helix 6
AA6
A
91 114Right-handed alpha
Helix 7
AA7
A
140 150Right-handed alpha
Helix 8
AA8
A
168 176Right-handed alpha
Helix 9
AA9
A
217 228Right-handed alpha
Helix 10
AB1
A
228 237Right-handed alpha
Helix 11
AB2
A
263 274Right-handed alpha
Helix 12
AB3
A
288 305Right-handed alpha
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There are 2 sheets in PDB entry 5ZMP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
2 5parallel
Strand 3
A
117 119parallel
Strand 4
A
279 283parallel
Strand 5
A
240 245parallel
Strand 6
A
158 162parallel
Strand 7
A
181 188parallel
Strand 8
A
207 212parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
86 88anti-parallel
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