Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZMU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZMU entry

There are 3 chains in PDB entry 5ZMU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 23ILE 312
B
 ARG 23ILE 312
C
 ARG 23ILE 91
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5ZMU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 62Right-handed alpha
Helix 2
AA2
A
80 95Right-handed alpha
Helix 3
AA3
A
115 122Right-handed alpha
Helix 4
AA4
A
161 176Right-handed alpha
Helix 5
AA5
A
185 198Right-handed alpha
Helix 6
AA6
A
223 232Right-handed alpha
Helix 7
AA7
A
251 262Right-handed alpha
Helix 8
AA8
A
274 278Right-handed 310
Helix 9
AA9
A
281 297Right-handed alpha
Helix 10
AB1
A
302 310Right-handed alpha
Helix 11
AB2
B
47 62Right-handed alpha
Helix 12
AB3
B
80 95Right-handed alpha
Helix 13
AB4
B
115 122Right-handed alpha
Helix 14
AB5
B
161 176Right-handed alpha
Helix 15
AB6
B
185 198Right-handed alpha
Helix 16
AB7
B
223 232Right-handed alpha
Helix 17
AB8
B
251 262Right-handed alpha
Helix 18
AB9
B
274 278Right-handed 310
Helix 19
AC1
B
281 297Right-handed alpha
Helix 20
AC2
B
302 310Right-handed alpha
Helix 21
AC3
C
47 62Right-handed alpha
Helix 22
AC4
C
80 95Right-handed alpha
Helix 23
AC5
C
115 122Right-handed alpha
Helix 24
AC6
C
161 176Right-handed alpha
Helix 25
AC7
C
185 198Right-handed alpha
Helix 26
AC8
C
223 232Right-handed alpha
Helix 27
AC9
C
251 262Right-handed alpha
Helix 28
AD1
C
274 278Right-handed 310
Helix 29
AD2
C
281 296Right-handed alpha
Helix 30
AD3
C
302 310Right-handed alpha
Helix 31
AD4
D
47 61Right-handed alpha
Helix 32
AD5
D
80 95Right-handed alpha
Helix 33
AD6
D
115 122Right-handed alpha
Helix 34
AD7
D
161 176Right-handed alpha
Helix 35
AD8
D
185 198Right-handed alpha
Helix 36
AD9
D
223 232Right-handed alpha
Helix 37
AE1
D
251 262Right-handed alpha
Helix 38
AE2
D
274 278Right-handed 310
Helix 39
AE3
D
281 296Right-handed alpha
Helix 40
AE4
D
302 310Right-handed alpha
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There are 14 sheets in PDB entry 5ZMU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 101first strand
Strand 2
A
65 68parallel
Strand 3
A
28 31parallel
Strand 4
A
264 267parallel
Strand 5
A
240 246parallel
Strand 6
A
205 211parallel
Strand 7
A
178 183parallel
Strand 8
A
131 135parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
157 158anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
150 151anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 101first strand
Strand 2
B
65 68parallel
Strand 3
B
28 31parallel
Strand 4
B
264 267parallel
Strand 5
B
240 246parallel
Strand 6
B
205 211parallel
Strand 7
B
178 183parallel
Strand 8
B
131 135parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 140first strand
Strand 2
B
157 158anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
150 151anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
98 101first strand
Strand 2
C
65 68parallel
Strand 3
C
28 31parallel
Strand 4
C
265 267parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 135first strand
Strand 2
C
178 183parallel
Strand 3
C
205 211parallel
Strand 4
C
240 246parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 140first strand
Strand 2
C
157 158anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 145first strand
Strand 2
C
150 151anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
98 101first strand
Strand 2
D
65 68parallel
Strand 3
D
28 31parallel
Strand 4
D
265 267parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
131 135first strand
Strand 2
D
178 183parallel
Strand 3
D
205 211parallel
Strand 4
D
240 246parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
139 140first strand
Strand 2
D
157 158anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
144 145first strand
Strand 2
D
150 151anti-parallel
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