Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZNH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZNH entry

There is 1 chain in PDB entry 5ZNH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 5ZNH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 26Right-handed alpha
Helix 2
AA2
A
73 87Right-handed alpha
Helix 3
AA3
A
159 162Right-handed 310
Helix 4
AA4
A
165 176Right-handed alpha
Helix 5
AA5
A
227 241Right-handed alpha
Helix 6
AA6
A
293 299Right-handed alpha
Helix 7
AA7
A
306 312Right-handed alpha
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There are 3 sheets in PDB entry 5ZNH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
40 43anti-parallel
Strand 3
A
53 57anti-parallel
Strand 4
A
3 13parallel
Strand 5
A
63 70anti-parallel
Strand 6
A
114 118parallel
Strand 7
A
104 108anti-parallel
Strand 8
A
90 93anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
148 158anti-parallel
Strand 3
A
217 225anti-parallel
Strand 4
A
269 274parallel
Strand 5
A
258 263anti-parallel
Strand 6
A
245 251anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
148 158anti-parallel
Strand 3
A
208 213parallel
Strand 4
A
193 200anti-parallel
Strand 5
A
180 187anti-parallel
Strand 6
A
287 290parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il