Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZNO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZNO entry

There are 2 chains in PDB entry 5ZNO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 46LYS 305
B
 ASP 46LEU 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5ZNO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 62Right-handed alpha
Helix 2
AA2
A
109 114Right-handed 310
Helix 3
AA3
A
115 122Right-handed alpha
Helix 4
AA4
A
138 156Right-handed alpha
Helix 5
AA5
A
158 163Right-handed alpha
Helix 6
AA6
A
176 189Right-handed alpha
Helix 7
AA7
A
230 238Right-handed alpha
Helix 8
AA8
A
255 259Right-handed 310
Helix 9
AA9
A
261 277Right-handed alpha
Helix 10
AB1
A
279 281Right-handed 310
Helix 11
AB2
A
282 287Right-handed alpha
Helix 12
AB3
B
56 62Right-handed alpha
Helix 13
AB4
B
109 114Right-handed 310
Helix 14
AB5
B
115 122Right-handed alpha
Helix 15
AB6
B
138 156Right-handed alpha
Helix 16
AB7
B
158 163Right-handed alpha
Helix 17
AB8
B
176 189Right-handed alpha
Helix 18
AB9
B
230 238Right-handed alpha
Helix 19
AC1
B
255 259Right-handed 310
Helix 20
AC2
B
261 277Right-handed alpha
Helix 21
AC3
B
279 281Right-handed 310
Helix 22
AC4
B
282 287Right-handed alpha
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There are 4 sheets in PDB entry 5ZNO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
84 89anti-parallel
Strand 3
A
126 130anti-parallel
Strand 4
A
97 103parallel
Strand 5
A
165 175parallel
Strand 6
A
194 198parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 219first strand
Strand 2
A
244 249parallel
Strand 3
A
295 300anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 74first strand
Strand 2
B
84 89anti-parallel
Strand 3
B
126 130anti-parallel
Strand 4
B
97 103parallel
Strand 5
B
165 175parallel
Strand 6
B
194 198parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 219first strand
Strand 2
B
244 249parallel
Strand 3
B
295 300anti-parallel
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