Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZNS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZNS entry

There is 1 chain in PDB entry 5ZNS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 162HIS 542
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5ZNS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
187 191Right-handed 310
Helix 2
AA2
A
192 196Right-handed 310
Helix 3
AA3
A
212 220Right-handed alpha
Helix 4
AA4
A
244 254Right-handed alpha
Helix 5
AA5
A
268 275Right-handed alpha
Helix 6
AA6
A
276 295Right-handed alpha
Helix 7
AA7
A
307 311Right-handed 310
Helix 8
AA8
A
313 324Right-handed alpha
Helix 9
AA9
A
393 397Right-handed 310
Helix 10
AB1
A
402 419Right-handed alpha
Helix 11
AB2
A
430 436Right-handed alpha
Helix 12
AB3
A
437 455Right-handed alpha
Helix 13
AB4
A
462 472Right-handed alpha
Helix 14
AB5
A
475 480Right-handed alpha
Helix 15
AB6
A
481 487Right-handed 310
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There are 5 sheets in PDB entry 5ZNS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 260first strand
Strand 2
A
235 238parallel
Strand 3
A
198 204parallel
Strand 4
A
425 429parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 260first strand
Strand 2
A
235 238parallel
Strand 3
A
198 204parallel
Strand 4
A
458 460parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 305first strand
Strand 2
A
328 329parallel
Strand 3
A
369 370parallel
Strand 4
A
344 345anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 334first strand
Strand 2
A
373 374parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 505first strand
Strand 2
A
515 519anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il