Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZO5 entry

There are 2 chains in PDB entry 5ZO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4SER 208
B
 ALA 3SER 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5ZO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 18Right-handed alpha
Helix 2
AA2
A
64 73Right-handed alpha
Helix 3
AA3
A
82 95Right-handed alpha
Helix 4
AA4
A
104 112Right-handed alpha
Helix 5
AA5
A
119 129Right-handed alpha
Helix 6
AA6
A
134 139Right-handed 310
Helix 7
AA7
A
147 157Right-handed alpha
Helix 8
AA8
A
160 175Right-handed alpha
Helix 9
AA9
A
177 197Right-handed alpha
Helix 10
AB1
B
13 18Right-handed alpha
Helix 11
AB2
B
64 73Right-handed alpha
Helix 12
AB3
B
82 95Right-handed alpha
Helix 13
AB4
B
104 112Right-handed alpha
Helix 14
AB5
B
119 128Right-handed alpha
Helix 15
AB6
B
147 157Right-handed alpha
Helix 16
AB7
B
160 175Right-handed alpha
Helix 17
AB8
B
177 197Right-handed alpha
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There are 2 sheets in PDB entry 5ZO5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
52 56parallel
Strand 3
A
40 46anti-parallel
Strand 4
A
24 30anti-parallel
Strand 5
A
78 80parallel
Strand 6
A
101 103parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 9first strand
Strand 2
B
52 56parallel
Strand 3
B
40 46anti-parallel
Strand 4
B
24 30anti-parallel
Strand 5
B
78 80parallel
Strand 6
B
101 103parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il