Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZON

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZON entry

There are 4 chains in PDB entry 5ZON (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 3	ASN 258
B	ASP 4	ASN 258
C	HIS 3	ASN 258
D	HIS 3	ASN 258

There are 38 helices in PDB entry 5ZON. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	26	Right-handed alpha
Helix 2	AA2	A	37	59	Right-handed alpha
Helix 3	AA3	A	87	92	Right-handed alpha
Helix 4	AA4	A	118	120	Right-handed 310
Helix 5	AA5	A	151	154	Right-handed 310
Helix 6	AA6	A	162	166	Right-handed 310
Helix 7	AA7	A	170	181	Right-handed alpha
Helix 8	AA8	A	188	198	Right-handed alpha
Helix 9	AA9	A	210	224	Right-handed alpha
Helix 10	AB1	A	249	258	Right-handed alpha
Helix 11	AB2	B	5	26	Right-handed alpha
Helix 12	AB3	B	37	59	Right-handed alpha
Helix 13	AB4	B	87	92	Right-handed alpha
Helix 14	AB5	B	118	120	Right-handed 310
Helix 15	AB6	B	151	154	Right-handed 310
Helix 16	AB7	B	169	181	Right-handed alpha
Helix 17	AB8	B	188	198	Right-handed alpha
Helix 18	AB9	B	210	224	Right-handed alpha
Helix 19	AC1	B	249	258	Right-handed alpha
Helix 20	AC2	C	4	26	Right-handed alpha
Helix 21	AC3	C	37	59	Right-handed alpha
Helix 22	AC4	C	87	92	Right-handed alpha
Helix 23	AC5	C	118	120	Right-handed 310
Helix 24	AC6	C	151	154	Right-handed 310
Helix 25	AC7	C	162	166	Right-handed 310
Helix 26	AC8	C	170	181	Right-handed alpha
Helix 27	AC9	C	188	198	Right-handed alpha
Helix 28	AD1	C	210	224	Right-handed alpha
Helix 29	AD2	C	249	258	Right-handed alpha
Helix 30	AD3	D	4	26	Right-handed alpha
Helix 31	AD4	D	37	59	Right-handed alpha
Helix 32	AD5	D	87	92	Right-handed alpha
Helix 33	AD6	D	118	120	Right-handed 310
Helix 34	AD7	D	151	154	Right-handed 310
Helix 35	AD8	D	170	181	Right-handed alpha
Helix 36	AD9	D	188	198	Right-handed alpha
Helix 37	AE1	D	210	224	Right-handed alpha
Helix 38	AE2	D	249	258	Right-handed alpha

There are 8 sheets in PDB entry 5ZON. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	66	first strand
Strand 2	A	78	86	parallel
Strand 3	A	99	106	anti-parallel
Strand 4	A	109	117	anti-parallel
Strand 5	A	122	127	anti-parallel
Strand 6	A	132	136	anti-parallel
Strand 7	A	142	143	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	185	first strand
Strand 2	A	156	158	parallel
Strand 3	A	203	206	parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	227	229	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	66	first strand
Strand 2	B	78	86	parallel
Strand 3	B	99	106	anti-parallel
Strand 4	B	109	117	anti-parallel
Strand 5	B	122	127	anti-parallel
Strand 6	B	131	136	anti-parallel
Strand 7	B	142	143	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	183	185	first strand
Strand 2	B	156	158	parallel
Strand 3	B	203	206	parallel
Strand 4	B	242	245	anti-parallel
Strand 5	B	227	229	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	66	first strand
Strand 2	C	78	86	parallel
Strand 3	C	99	106	anti-parallel
Strand 4	C	109	117	anti-parallel
Strand 5	C	122	127	anti-parallel
Strand 6	C	131	136	anti-parallel
Strand 7	C	142	143	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	183	185	first strand
Strand 2	C	156	158	parallel
Strand 3	C	203	206	parallel
Strand 4	C	242	245	anti-parallel
Strand 5	C	227	229	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	66	first strand
Strand 2	D	78	86	parallel
Strand 3	D	99	106	anti-parallel
Strand 4	D	109	117	anti-parallel
Strand 5	D	122	127	anti-parallel
Strand 6	D	131	136	anti-parallel
Strand 7	D	142	143	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	183	185	first strand
Strand 2	D	156	158	parallel
Strand 3	D	203	206	parallel
Strand 4	D	242	245	anti-parallel
Strand 5	D	227	229	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZON

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZON