Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZQ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZQ2 entry

There are 2 chains in PDB entry 5ZQ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 222LEU 1058
C
 VAL 223LEU 1058
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 81 helices in PDB entry 5ZQ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
234 248Right-handed alpha
Helix 2
AA2
A
275 299Right-handed alpha
Helix 3
AA3
A
311 315Right-handed 310
Helix 4
AA4
A
316 330Right-handed alpha
Helix 5
AA5
A
342 361Right-handed alpha
Helix 6
AA6
A
361 366Right-handed alpha
Helix 7
AA7
A
372 385Right-handed alpha
Helix 8
AA8
A
393 406Right-handed alpha
Helix 9
AA9
A
413 430Right-handed alpha
Helix 10
AB1
A
430 448Right-handed alpha
Helix 11
AB2
A
513 519Right-handed alpha
Helix 12
AB3
A
520 525Right-handed alpha
Helix 13
AB4
A
542 551Right-handed alpha
Helix 14
AB5
A
552 559Right-handed alpha
Helix 15
AB6
A
561 584Right-handed alpha
Helix 16
AB7
A
597 613Right-handed alpha
Helix 17
AB8
A
614 617Right-handed 310
Helix 18
AB9
A
630 641Right-handed alpha
Helix 19
AC1
A
642 648Right-handed alpha
Helix 20
AC2
A
651 657Right-handed alpha
Helix 21
AC3
A
657 665Right-handed alpha
Helix 22
AC4
A
682 689Right-handed alpha
Helix 23
AC5
A
695 710Right-handed alpha
Helix 24
AC6
A
710 722Right-handed alpha
Helix 25
AC7
A
729 751Right-handed alpha
Helix 26
AC8
A
766 783Right-handed alpha
Helix 27
AC9
A
792 804Right-handed alpha
Helix 28
AD1
A
805 809Right-handed 310
Helix 29
AD2
A
820 825Right-handed alpha
Helix 30
AD3
A
896 899Right-handed 310
Helix 31
AD4
A
907 914Right-handed alpha
Helix 32
AD5
A
919 929Right-handed alpha
Helix 33
AD6
A
934 950Right-handed alpha
Helix 34
AD7
A
956 964Right-handed alpha
Helix 35
AD8
A
964 978Right-handed alpha
Helix 36
AD9
A
980 989Right-handed alpha
Helix 37
AE1
A
993 998Right-handed alpha
Helix 38
AE2
A
1002 1026Right-handed alpha
Helix 39
AE3
A
1028 1041Right-handed alpha
Helix 40
AE4
A
1044 1054Right-handed alpha
Helix 41
AE5
C
234 248Right-handed alpha
Helix 42
AE6
C
275 299Right-handed alpha
Helix 43
AE7
C
311 315Right-handed 310
Helix 44
AE8
C
316 330Right-handed alpha
Helix 45
AE9
C
342 361Right-handed alpha
Helix 46
AF1
C
361 366Right-handed alpha
Helix 47
AF2
C
372 385Right-handed alpha
Helix 48
AF3
C
393 406Right-handed alpha
Helix 49
AF4
C
413 430Right-handed alpha
Helix 50
AF5
C
430 448Right-handed alpha
Helix 51
AF6
C
513 518Right-handed alpha
Helix 52
AF7
C
520 525Right-handed alpha
Helix 53
AF8
C
542 551Right-handed alpha
Helix 54
AF9
C
552 561Right-handed alpha
Helix 55
AG1
C
561 584Right-handed alpha
Helix 56
AG2
C
597 613Right-handed alpha
Helix 57
AG3
C
614 617Right-handed 310
Helix 58
AG4
C
630 641Right-handed alpha
Helix 59
AG5
C
642 648Right-handed alpha
Helix 60
AG6
C
651 657Right-handed alpha
Helix 61
AG7
C
657 665Right-handed alpha
Helix 62
AG8
C
682 690Right-handed alpha
Helix 63
AG9
C
695 710Right-handed alpha
Helix 64
AH1
C
710 722Right-handed alpha
Helix 65
AH2
C
729 751Right-handed alpha
Helix 66
AH3
C
766 783Right-handed alpha
Helix 67
AH4
C
792 804Right-handed alpha
Helix 68
AH5
C
805 810Right-handed 310
Helix 69
AH6
C
820 825Right-handed alpha
Helix 70
AH7
C
896 899Right-handed 310
Helix 71
AH8
C
907 913Right-handed alpha
Helix 72
AH9
C
919 929Right-handed alpha
Helix 73
AI1
C
934 950Right-handed alpha
Helix 74
AI2
C
954 964Right-handed alpha
Helix 75
AI3
C
965 979Right-handed alpha
Helix 76
AI4
C
980 988Right-handed alpha
Helix 77
AI5
C
989 991Right-handed 310
Helix 78
AI6
C
993 998Right-handed alpha
Helix 79
AI7
C
1002 1026Right-handed alpha
Helix 80
AI8
C
1028 1041Right-handed alpha
Helix 81
AI9
C
1044 1054Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 5ZQ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
267 269anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 456first strand
Strand 2
A
533 534anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 474first strand
Strand 2
A
510 511anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
622 624first strand
Strand 2
A
627 629anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
669 670first strand
Strand 2
A
680 681anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 763first strand
Strand 2
A
831 836anti-parallel
Strand 3
A
884 894parallel
Strand 4
A
866 878anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
814 817first strand
Strand 2
A
857 860anti-parallel
Strand 3
A
845 846anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
262 264first strand
Strand 2
C
267 269anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
455 456first strand
Strand 2
C
533 534anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
473 474first strand
Strand 2
C
510 511anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
622 623first strand
Strand 2
C
628 629anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
669 670first strand
Strand 2
C
680 681anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
758 763first strand
Strand 2
C
831 836anti-parallel
Strand 3
C
884 894parallel
Strand 4
C
866 878anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
814 817first strand
Strand 2
C
857 860anti-parallel
Strand 3
C
845 846anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il