Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZQ6 entry

There are 4 chains in PDB entry 5ZQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 222LEU 1058
B
 MET 1GLY 76
D
 MET 1GLY 76
C
 VAL 223GLN 509
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 5ZQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
234 248Right-handed alpha
Helix 2
AA2
A
275 299Right-handed alpha
Helix 3
AA3
A
311 315Right-handed 310
Helix 4
AA4
A
316 330Right-handed alpha
Helix 5
AA5
A
342 361Right-handed alpha
Helix 6
AA6
A
361 366Right-handed alpha
Helix 7
AA7
A
372 385Right-handed alpha
Helix 8
AA8
A
393 405Right-handed alpha
Helix 9
AA9
A
413 430Right-handed alpha
Helix 10
AB1
A
430 448Right-handed alpha
Helix 11
AB2
A
513 519Right-handed alpha
Helix 12
AB3
A
520 525Right-handed alpha
Helix 13
AB4
A
542 551Right-handed alpha
Helix 14
AB5
A
553 559Right-handed alpha
Helix 15
AB6
A
561 576Right-handed alpha
Helix 16
AB7
A
578 585Right-handed alpha
Helix 17
AB8
A
597 613Right-handed alpha
Helix 18
AB9
A
614 617Right-handed 310
Helix 19
AC1
A
630 641Right-handed alpha
Helix 20
AC2
A
642 649Right-handed alpha
Helix 21
AC3
A
651 665Right-handed alpha
Helix 22
AC4
A
682 690Right-handed alpha
Helix 23
AC5
A
695 710Right-handed alpha
Helix 24
AC6
A
710 722Right-handed alpha
Helix 25
AC7
A
729 751Right-handed alpha
Helix 26
AC8
A
766 783Right-handed alpha
Helix 27
AC9
A
792 804Right-handed alpha
Helix 28
AD1
A
805 810Right-handed 310
Helix 29
AD2
A
820 825Right-handed alpha
Helix 30
AD3
A
896 899Right-handed 310
Helix 31
AD4
A
907 915Right-handed alpha
Helix 32
AD5
A
919 930Right-handed alpha
Helix 33
AD6
A
934 950Right-handed alpha
Helix 34
AD7
A
957 965Right-handed alpha
Helix 35
AD8
A
965 979Right-handed alpha
Helix 36
AD9
A
981 991Right-handed alpha
Helix 37
AE1
A
993 999Right-handed alpha
Helix 38
AE2
A
1002 1026Right-handed alpha
Helix 39
AE3
A
1028 1042Right-handed alpha
Helix 40
AE4
A
1044 1054Right-handed alpha
Helix 41
AE5
B
22 35Right-handed alpha
Helix 42
AE6
B
37 39Right-handed 310
Helix 43
AE7
B
56 60Right-handed 310
Helix 44
AE8
D
22 35Right-handed alpha
Helix 45
AE9
D
37 39Right-handed 310
Helix 46
AF1
D
55 60Right-handed 310
Helix 47
AF2
C
234 248Right-handed alpha
Helix 48
AF3
C
275 299Right-handed alpha
Helix 49
AF4
C
311 315Right-handed 310
Helix 50
AF5
C
316 330Right-handed alpha
Helix 51
AF6
C
342 361Right-handed alpha
Helix 52
AF7
C
361 366Right-handed alpha
Helix 53
AF8
C
372 385Right-handed alpha
Helix 54
AF9
C
393 406Right-handed alpha
Helix 55
AG1
C
413 430Right-handed alpha
Helix 56
AG2
C
430 448Right-handed alpha
Helix 57
AG3
C
513 520Right-handed alpha
Helix 58
AG4
C
520 525Right-handed alpha
Helix 59
AG5
C
542 551Right-handed alpha
Helix 60
AG6
C
552 561Right-handed alpha
Helix 61
AG7
C
561 576Right-handed alpha
Helix 62
AG8
C
578 585Right-handed alpha
Helix 63
AG9
C
597 613Right-handed alpha
Helix 64
AH1
C
630 641Right-handed alpha
Helix 65
AH2
C
642 649Right-handed alpha
Helix 66
AH3
C
651 665Right-handed alpha
Helix 67
AH4
C
682 690Right-handed alpha
Helix 68
AH5
C
695 710Right-handed alpha
Helix 69
AH6
C
710 722Right-handed alpha
Helix 70
AH7
C
729 751Right-handed alpha
Helix 71
AH8
C
766 783Right-handed alpha
Helix 72
AH9
C
792 804Right-handed alpha
Helix 73
AI1
C
805 810Right-handed 310
Helix 74
AI2
C
820 825Right-handed alpha
Helix 75
AI3
C
896 899Right-handed 310
Helix 76
AI4
C
907 915Right-handed alpha
Helix 77
AI5
C
919 930Right-handed alpha
Helix 78
AI6
C
934 950Right-handed alpha
Helix 79
AI7
C
955 965Right-handed alpha
Helix 80
AI8
C
965 979Right-handed alpha
Helix 81
AI9
C
980 991Right-handed alpha
Helix 82
AJ1
C
993 999Right-handed alpha
Helix 83
AJ2
C
1002 1028Right-handed alpha
Helix 84
AJ3
C
1028 1042Right-handed alpha
Helix 85
AJ4
C
1044 1054Right-handed alpha
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There are 16 sheets in PDB entry 5ZQ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
267 269anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 456first strand
Strand 2
A
533 534anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 474first strand
Strand 2
A
510 511anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
622 624first strand
Strand 2
A
627 629anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
669 670first strand
Strand 2
A
680 681anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 763first strand
Strand 2
A
831 836anti-parallel
Strand 3
A
884 894parallel
Strand 4
A
866 878anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
813 817first strand
Strand 2
A
857 861anti-parallel
Strand 3
A
845 846anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 7anti-parallel
Strand 3
B
66 71parallel
Strand 4
B
41 45anti-parallel
Strand 5
B
48 49anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 7anti-parallel
Strand 3
D
66 71parallel
Strand 4
D
41 45anti-parallel
Strand 5
D
48 49anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
262 264first strand
Strand 2
C
267 269anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
455 456first strand
Strand 2
C
533 534anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
473 474first strand
Strand 2
C
510 511anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
617 618first strand
Strand 2
C
621 624anti-parallel
Strand 3
C
627 629anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
669 670first strand
Strand 2
C
680 681anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
758 763first strand
Strand 2
C
831 836anti-parallel
Strand 3
C
884 894parallel
Strand 4
C
866 878anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
814 817first strand
Strand 2
C
857 860anti-parallel
Strand 3
C
845 846anti-parallel
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