Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZQL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZQL entry

There are 2 chains in PDB entry 5ZQL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 VAL 192CYS 491
A
 VAL 192GLY 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5ZQL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
193 200Right-handed alpha
Helix 2
AA2
B
213 225Right-handed alpha
Helix 3
AA3
B
225 235Right-handed alpha
Helix 4
AA4
B
254 264Right-handed alpha
Helix 5
AA5
B
275 282Right-handed alpha
Helix 6
AA6
B
288 300Right-handed alpha
Helix 7
AA7
B
323 337Right-handed alpha
Helix 8
AA8
B
361 365Right-handed 310
Helix 9
AA9
B
366 373Right-handed alpha
Helix 10
AB1
B
383 394Right-handed alpha
Helix 11
AB2
B
406 411Right-handed alpha
Helix 12
AB3
B
417 431Right-handed alpha
Helix 13
AB4
B
432 438Right-handed alpha
Helix 14
AB5
B
459 467Right-handed alpha
Helix 15
AB6
B
474 488Right-handed alpha
Helix 16
AB7
A
193 200Right-handed alpha
Helix 17
AB8
A
213 223Right-handed alpha
Helix 18
AB9
A
225 236Right-handed alpha
Helix 19
AC1
A
254 264Right-handed alpha
Helix 20
AC2
A
275 281Right-handed alpha
Helix 21
AC3
A
285 300Right-handed alpha
Helix 22
AC4
A
325 337Right-handed alpha
Helix 23
AC5
A
361 365Right-handed 310
Helix 24
AC6
A
366 373Right-handed alpha
Helix 25
AC7
A
386 394Right-handed alpha
Helix 26
AC8
A
406 413Right-handed alpha
Helix 27
AC9
A
417 437Right-handed alpha
Helix 28
AD1
A
459 467Right-handed alpha
Helix 29
AD2
A
474 488Right-handed alpha
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There are 2 sheets in PDB entry 5ZQL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 274first strand
Strand 2
B
303 308parallel
Strand 3
B
355 359parallel
Strand 4
B
245 248parallel
Strand 5
B
375 378parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 274first strand
Strand 2
A
303 308parallel
Strand 3
A
354 359parallel
Strand 4
A
245 248parallel
Strand 5
A
375 378parallel
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