Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZQT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZQT entry

There are 3 chains in PDB entry 5ZQT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 42ALA 503
B
 ILE 42ALA 503
C
 ILE 42ALA 503
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 5ZQT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 57Right-handed alpha
Helix 2
AA2
A
59 79Right-handed alpha
Helix 3
AA3
A
124 127Right-handed alpha
Helix 4
AA4
A
140 145Right-handed 310
Helix 5
AA5
A
147 165Right-handed alpha
Helix 6
AA6
A
207 211Right-handed 310
Helix 7
AA7
A
214 225Right-handed alpha
Helix 8
AA8
A
237 250Right-handed alpha
Helix 9
AA9
A
272 274Right-handed 310
Helix 10
AB1
A
292 296Right-handed 310
Helix 11
AB2
A
304 313Right-handed alpha
Helix 12
AB3
A
322 326Right-handed 310
Helix 13
AB4
A
327 346Right-handed alpha
Helix 14
AB5
A
354 359Right-handed 310
Helix 15
AB6
A
364 374Right-handed alpha
Helix 16
AB7
A
379 391Right-handed alpha
Helix 17
AB8
A
396 429Right-handed alpha
Helix 18
AB9
A
450 456Right-handed alpha
Helix 19
AC1
A
456 477Right-handed alpha
Helix 20
AC2
A
486 498Right-handed alpha
Helix 21
AC3
B
43 57Right-handed alpha
Helix 22
AC4
B
59 79Right-handed alpha
Helix 23
AC5
B
140 145Right-handed 310
Helix 24
AC6
B
147 164Right-handed alpha
Helix 25
AC7
B
207 211Right-handed 310
Helix 26
AC8
B
214 225Right-handed alpha
Helix 27
AC9
B
237 250Right-handed alpha
Helix 28
AD1
B
272 274Right-handed 310
Helix 29
AD2
B
292 296Right-handed 310
Helix 30
AD3
B
304 313Right-handed alpha
Helix 31
AD4
B
322 326Right-handed 310
Helix 32
AD5
B
330 346Right-handed alpha
Helix 33
AD6
B
354 359Right-handed 310
Helix 34
AD7
B
364 373Right-handed alpha
Helix 35
AD8
B
379 391Right-handed alpha
Helix 36
AD9
B
396 429Right-handed alpha
Helix 37
AE1
B
450 455Right-handed alpha
Helix 38
AE2
B
456 472Right-handed alpha
Helix 39
AE3
B
474 477Right-handed 310
Helix 40
AE4
B
486 498Right-handed alpha
Helix 41
AE5
C
43 56Right-handed alpha
Helix 42
AE6
C
59 79Right-handed alpha
Helix 43
AE7
C
123 128Right-handed alpha
Helix 44
AE8
C
140 145Right-handed 310
Helix 45
AE9
C
147 164Right-handed alpha
Helix 46
AF1
C
214 226Right-handed alpha
Helix 47
AF2
C
237 248Right-handed alpha
Helix 48
AF3
C
272 274Right-handed 310
Helix 49
AF4
C
292 296Right-handed 310
Helix 50
AF5
C
304 313Right-handed alpha
Helix 51
AF6
C
322 326Right-handed 310
Helix 52
AF7
C
330 346Right-handed alpha
Helix 53
AF8
C
354 359Right-handed 310
Helix 54
AF9
C
364 373Right-handed alpha
Helix 55
AG1
C
379 391Right-handed alpha
Helix 56
AG2
C
396 429Right-handed alpha
Helix 57
AG3
C
450 456Right-handed alpha
Helix 58
AG4
C
456 472Right-handed alpha
Helix 59
AG5
C
472 477Right-handed alpha
Helix 60
AG6
C
486 499Right-handed alpha
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There are 9 sheets in PDB entry 5ZQT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
286 290anti-parallel
Strand 3
A
263 270anti-parallel
Strand 4
A
253 259anti-parallel
Strand 5
A
444 449parallel
Strand 6
A
479 483parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 138first strand
Strand 2
A
114 123anti-parallel
Strand 3
A
102 110anti-parallel
Strand 4
A
178 184parallel
Strand 5
A
230 236parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 192first strand
Strand 2
A
195 198anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 90first strand
Strand 2
B
286 290anti-parallel
Strand 3
B
263 270anti-parallel
Strand 4
B
253 259anti-parallel
Strand 5
B
444 449parallel
Strand 6
B
479 483parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 138first strand
Strand 2
B
114 123anti-parallel
Strand 3
B
102 110anti-parallel
Strand 4
B
178 184parallel
Strand 5
B
230 236parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 192first strand
Strand 2
B
195 198anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
89 90first strand
Strand 2
C
286 290anti-parallel
Strand 3
C
263 270anti-parallel
Strand 4
C
253 259anti-parallel
Strand 5
C
444 449parallel
Strand 6
C
479 483parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
129 138first strand
Strand 2
C
114 122anti-parallel
Strand 3
C
103 110anti-parallel
Strand 4
C
178 184parallel
Strand 5
C
230 236parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
188 192first strand
Strand 2
C
195 198anti-parallel
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