Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZQU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZQU entry

There are 4 chains in PDB entry 5ZQU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 263GLN 460
B
 PRO 261PRO 458
C
 ASN 262PRO 458
D
 PRO 264HIS 459
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 5ZQU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
263 286Right-handed alpha
Helix 2
AA2
A
293 317Right-handed alpha
Helix 3
AA3
A
334 340Right-handed alpha
Helix 4
AA4
A
342 353Right-handed alpha
Helix 5
AA5
A
353 360Right-handed alpha
Helix 6
AA6
A
363 376Right-handed alpha
Helix 7
AA7
A
385 408Right-handed alpha
Helix 8
AA8
A
413 420Right-handed alpha
Helix 9
AA9
A
421 435Right-handed alpha
Helix 10
AB1
A
436 441Right-handed alpha
Helix 11
AB2
A
444 457Right-handed alpha
Helix 12
AB3
B
263 286Right-handed alpha
Helix 13
AB4
B
293 317Right-handed alpha
Helix 14
AB5
B
334 340Right-handed alpha
Helix 15
AB6
B
342 353Right-handed alpha
Helix 16
AB7
B
353 360Right-handed alpha
Helix 17
AB8
B
363 376Right-handed alpha
Helix 18
AB9
B
385 408Right-handed alpha
Helix 19
AC1
B
413 420Right-handed alpha
Helix 20
AC2
B
421 435Right-handed alpha
Helix 21
AC3
B
436 443Right-handed alpha
Helix 22
AC4
B
443 456Right-handed alpha
Helix 23
AC5
C
263 286Right-handed alpha
Helix 24
AC6
C
293 317Right-handed alpha
Helix 25
AC7
C
334 340Right-handed alpha
Helix 26
AC8
C
342 353Right-handed alpha
Helix 27
AC9
C
353 360Right-handed alpha
Helix 28
AD1
C
363 376Right-handed alpha
Helix 29
AD2
C
385 408Right-handed alpha
Helix 30
AD3
C
413 420Right-handed alpha
Helix 31
AD4
C
421 435Right-handed alpha
Helix 32
AD5
C
436 443Right-handed alpha
Helix 33
AD6
C
443 457Right-handed alpha
Helix 34
AD7
D
265 286Right-handed alpha
Helix 35
AD8
D
293 317Right-handed alpha
Helix 36
AD9
D
334 340Right-handed alpha
Helix 37
AE1
D
342 353Right-handed alpha
Helix 38
AE2
D
353 360Right-handed alpha
Helix 39
AE3
D
363 376Right-handed alpha
Helix 40
AE4
D
385 408Right-handed alpha
Helix 41
AE5
D
413 420Right-handed alpha
Helix 42
AE6
D
421 435Right-handed alpha
Helix 43
AE7
D
436 441Right-handed alpha
Helix 44
AE8
D
444 457Right-handed alpha
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There are 4 sheets in PDB entry 5ZQU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
331 333anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 325first strand
Strand 2
B
331 333anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
323 325first strand
Strand 2
C
331 333anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
323 325first strand
Strand 2
D
331 333anti-parallel
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