Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZQZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZQZ entry

There are 4 chains in PDB entry 5ZQZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 37	GLN 763
B	PRO 49	LYS 474
C	THR 37	GLN 763
D	PRO 49	LYS 474

There are102 helices in PDB entry 5ZQZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	81	Right-handed alpha
Helix 2	AA2	A	103	108	Right-handed alpha
Helix 3	AA3	A	112	126	Right-handed alpha
Helix 4	AA4	A	126	131	Right-handed alpha
Helix 5	AA5	A	148	154	Right-handed alpha
Helix 6	AA6	A	183	186	Right-handed 310
Helix 7	AA7	A	187	192	Right-handed alpha
Helix 8	AA8	A	193	202	Right-handed alpha
Helix 9	AA9	A	210	216	Right-handed alpha
Helix 10	AB1	A	233	253	Right-handed alpha
Helix 11	AB2	A	267	272	Right-handed alpha
Helix 12	AB3	A	279	294	Right-handed alpha
Helix 13	AB4	A	301	312	Right-handed alpha
Helix 14	AB5	A	317	322	Right-handed 310
Helix 15	AB6	A	323	332	Right-handed alpha
Helix 16	AB7	A	338	349	Right-handed alpha
Helix 17	AB8	A	372	380	Right-handed alpha
Helix 18	AB9	A	393	396	Right-handed 310
Helix 19	AC1	A	397	405	Right-handed alpha
Helix 20	AC2	A	405	414	Right-handed alpha
Helix 21	AC3	A	418	427	Right-handed alpha
Helix 22	AC4	A	453	462	Right-handed alpha
Helix 23	AC5	A	518	533	Right-handed alpha
Helix 24	AC6	A	546	556	Right-handed alpha
Helix 25	AC7	A	557	562	Right-handed alpha
Helix 26	AC8	A	568	579	Right-handed alpha
Helix 27	AC9	A	583	592	Right-handed alpha
Helix 28	AD1	A	592	605	Right-handed alpha
Helix 29	AD2	A	618	626	Right-handed alpha
Helix 30	AD3	A	628	633	Right-handed 310
Helix 31	AD4	A	651	657	Right-handed alpha
Helix 32	AD5	A	669	688	Right-handed alpha
Helix 33	AD6	A	696	699	Right-handed 310
Helix 34	AD7	A	700	705	Right-handed alpha
Helix 35	AD8	A	716	720	Right-handed 310
Helix 36	AD9	A	725	736	Right-handed alpha
Helix 37	AE1	A	747	753	Right-handed alpha
Helix 38	AE2	B	69	73	Right-handed 310
Helix 39	AE3	B	77	88	Right-handed alpha
Helix 40	AE4	B	114	122	Right-handed alpha
Helix 41	AE5	B	143	154	Right-handed alpha
Helix 42	AE6	B	178	186	Right-handed 310
Helix 43	AE7	B	194	201	Right-handed alpha
Helix 44	AE8	B	222	234	Right-handed alpha
Helix 45	AE9	B	239	259	Right-handed alpha
Helix 46	AF1	B	323	330	Right-handed alpha
Helix 47	AF2	B	354	357	Right-handed 310
Helix 48	AF3	B	358	367	Right-handed alpha
Helix 49	AF4	B	384	392	Right-handed alpha
Helix 50	AF5	B	393	395	Right-handed 310
Helix 51	AF6	B	438	448	Right-handed alpha
Helix 52	AF7	C	65	81	Right-handed alpha
Helix 53	AF8	C	103	108	Right-handed alpha
Helix 54	AF9	C	112	126	Right-handed alpha
Helix 55	AG1	C	126	131	Right-handed alpha
Helix 56	AG2	C	148	154	Right-handed alpha
Helix 57	AG3	C	183	186	Right-handed 310
Helix 58	AG4	C	187	192	Right-handed alpha
Helix 59	AG5	C	193	202	Right-handed alpha
Helix 60	AG6	C	210	216	Right-handed alpha
Helix 61	AG7	C	233	253	Right-handed alpha
Helix 62	AG8	C	267	272	Right-handed alpha
Helix 63	AG9	C	279	294	Right-handed alpha
Helix 64	AH1	C	301	312	Right-handed alpha
Helix 65	AH2	C	317	322	Right-handed 310
Helix 66	AH3	C	323	332	Right-handed alpha
Helix 67	AH4	C	338	349	Right-handed alpha
Helix 68	AH5	C	372	380	Right-handed alpha
Helix 69	AH6	C	393	396	Right-handed 310
Helix 70	AH7	C	397	405	Right-handed alpha
Helix 71	AH8	C	405	414	Right-handed alpha
Helix 72	AH9	C	418	427	Right-handed alpha
Helix 73	AI1	C	453	462	Right-handed alpha
Helix 74	AI2	C	518	533	Right-handed alpha
Helix 75	AI3	C	546	556	Right-handed alpha
Helix 76	AI4	C	557	562	Right-handed alpha
Helix 77	AI5	C	568	579	Right-handed alpha
Helix 78	AI6	C	583	592	Right-handed alpha
Helix 79	AI7	C	592	605	Right-handed alpha
Helix 80	AI8	C	618	626	Right-handed alpha
Helix 81	AI9	C	628	633	Right-handed 310
Helix 82	AJ1	C	651	657	Right-handed alpha
Helix 83	AJ2	C	669	688	Right-handed alpha
Helix 84	AJ3	C	696	699	Right-handed 310
Helix 85	AJ4	C	700	705	Right-handed alpha
Helix 86	AJ5	C	716	720	Right-handed 310
Helix 87	AJ6	C	725	736	Right-handed alpha
Helix 88	AJ7	C	747	753	Right-handed alpha
Helix 89	AJ8	D	69	73	Right-handed 310
Helix 90	AJ9	D	77	88	Right-handed alpha
Helix 91	AK1	D	114	122	Right-handed alpha
Helix 92	AK2	D	143	154	Right-handed alpha
Helix 93	AK3	D	178	186	Right-handed 310
Helix 94	AK4	D	194	201	Right-handed alpha
Helix 95	AK5	D	222	234	Right-handed alpha
Helix 96	AK6	D	239	259	Right-handed alpha
Helix 97	AK7	D	323	330	Right-handed alpha
Helix 98	AK8	D	354	357	Right-handed 310
Helix 99	AK9	D	358	367	Right-handed alpha
Helix 100	AL1	D	384	392	Right-handed alpha
Helix 101	AL2	D	393	395	Right-handed 310
Helix 102	AL3	D	438	448	Right-handed alpha

There are 16 sheets in PDB entry 5ZQZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	42	first strand
Strand 2	A	49	54	anti-parallel
Strand 3	A	45	46	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	42	first strand
Strand 2	A	49	54	anti-parallel
Strand 3	A	88	92	parallel
Strand 4	A	137	138	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	146	first strand
Strand 2	A	168	170	parallel
Strand 3	A	207	208	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	162	first strand
Strand 2	A	220	222	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	430	first strand
Strand 2	A	387	390	parallel
Strand 3	A	366	367	parallel
Strand 4	A	444	446	parallel
Strand 5	A	472	474	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	496	498	first strand
Strand 2	A	510	513	anti-parallel
Strand 3	A	538	540	parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	66	first strand
Strand 2	B	312	317	anti-parallel
Strand 3	B	159	166	anti-parallel
Strand 4	B	100	103	parallel
Strand 5	B	132	135	parallel
Strand 6	D	132	135	anti-parallel
Strand 7	D	100	103	parallel
Strand 8	D	159	166	parallel
Strand 9	D	312	317	anti-parallel
Strand 10	D	65	66	anti-parallel

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There are 12 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	335	336	first strand
Strand 2	B	54	57	anti-parallel
Strand 3	B	319	322	anti-parallel
Strand 4	B	159	166	anti-parallel
Strand 5	B	100	103	parallel
Strand 6	B	132	135	parallel
Strand 7	D	132	135	anti-parallel
Strand 8	D	100	103	parallel
Strand 9	D	159	166	parallel
Strand 10	D	319	322	anti-parallel
Strand 11	D	54	57	anti-parallel
Strand 12	D	335	336	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	340	341	first strand
Strand 2	B	464	470	anti-parallel
Strand 3	B	452	458	anti-parallel
Strand 4	B	377	378	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	42	first strand
Strand 2	C	49	54	anti-parallel
Strand 3	C	45	46	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	42	first strand
Strand 2	C	49	54	anti-parallel
Strand 3	C	88	92	parallel
Strand 4	C	137	138	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	146	first strand
Strand 2	C	168	170	parallel
Strand 3	C	207	208	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	162	first strand
Strand 2	C	220	222	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	429	430	first strand
Strand 2	C	387	390	parallel
Strand 3	C	366	367	parallel
Strand 4	C	444	446	parallel
Strand 5	C	472	474	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	498	first strand
Strand 2	C	510	513	anti-parallel
Strand 3	C	538	540	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	340	341	first strand
Strand 2	D	464	470	anti-parallel
Strand 3	D	452	458	anti-parallel
Strand 4	D	377	378	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZQZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZQZ