Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZR2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZR2 entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 4 chains in PDB entry 5ZR2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 197
B
 MET 1LEU 197
C
 MET 1THR 198
D
 MET 1LEU 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5ZR2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 18Right-handed alpha
Helix 2
AA2
A
29 44Right-handed alpha
Helix 3
AA3
A
55 67Right-handed alpha
Helix 4
AA4
A
75 78Right-handed 310
Helix 5
AA5
A
82 86Right-handed 310
Helix 6
AA6
A
90 95Right-handed 310
Helix 7
AA7
A
96 105Right-handed alpha
Helix 8
AA8
A
106 109Right-handed 310
Helix 9
AA9
A
117 136Right-handed alpha
Helix 10
AB1
A
146 159Right-handed alpha
Helix 11
AB2
A
161 168Right-handed 310
Helix 12
AB3
B
12 18Right-handed alpha
Helix 13
AB4
B
29 44Right-handed alpha
Helix 14
AB5
B
55 67Right-handed alpha
Helix 15
AB6
B
75 78Right-handed 310
Helix 16
AB7
B
82 86Right-handed 310
Helix 17
AB8
B
90 95Right-handed 310
Helix 18
AB9
B
96 105Right-handed alpha
Helix 19
AC1
B
106 109Right-handed 310
Helix 20
AC2
B
117 136Right-handed alpha
Helix 21
AC3
B
146 159Right-handed alpha
Helix 22
AC4
B
161 168Right-handed 310
Helix 23
AC5
C
12 17Right-handed alpha
Helix 24
AC6
C
29 44Right-handed alpha
Helix 25
AC7
C
55 67Right-handed alpha
Helix 26
AC8
C
75 78Right-handed 310
Helix 27
AC9
C
82 86Right-handed 310
Helix 28
AD1
C
90 94Right-handed 310
Helix 29
AD2
C
96 105Right-handed alpha
Helix 30
AD3
C
106 109Right-handed 310
Helix 31
AD4
C
117 136Right-handed alpha
Helix 32
AD5
C
146 159Right-handed alpha
Helix 33
AD6
C
161 168Right-handed 310
Helix 34
AD7
D
12 17Right-handed alpha
Helix 35
AD8
D
29 44Right-handed alpha
Helix 36
AD9
D
55 67Right-handed alpha
Helix 37
AE1
D
75 78Right-handed 310
Helix 38
AE2
D
82 86Right-handed 310
Helix 39
AE3
D
96 105Right-handed alpha
Helix 40
AE4
D
106 109Right-handed 310
Helix 41
AE5
D
117 136Right-handed alpha
Helix 42
AE6
D
146 159Right-handed alpha
Helix 43
AE7
D
161 168Right-handed 310
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There are 4 sheets in PDB entry 5ZR2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
49 52parallel
Strand 3
A
140 145parallel
Strand 4
A
3 8parallel
Strand 5
A
175 180anti-parallel
Strand 6
A
185 192anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 73first strand
Strand 2
B
49 52parallel
Strand 3
B
140 145parallel
Strand 4
B
3 8parallel
Strand 5
B
175 181anti-parallel
Strand 6
B
184 192anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 73first strand
Strand 2
C
49 52parallel
Strand 3
C
140 145parallel
Strand 4
C
3 8parallel
Strand 5
C
175 181anti-parallel
Strand 6
C
184 192anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
71 73first strand
Strand 2
D
49 52parallel
Strand 3
D
140 145parallel
Strand 4
D
3 8parallel
Strand 5
D
175 179anti-parallel
Strand 6
D
186 192anti-parallel
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