Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZR4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZR4 entry

There are 2 chains in PDB entry 5ZR4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 14LEU 229
B
 GLN 15LEU 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5ZR4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 16Right-handed 310
Helix 2
AA2
A
17 25Right-handed alpha
Helix 3
AA3
A
49 56Right-handed alpha
Helix 4
AA4
A
57 59Right-handed 310
Helix 5
AA5
A
72 96Right-handed alpha
Helix 6
AA6
A
103 112Right-handed alpha
Helix 7
AA7
A
116 127Right-handed alpha
Helix 8
AA8
A
172 182Right-handed alpha
Helix 9
AA9
A
219 223Right-handed 310
Helix 10
AB1
B
16 25Right-handed alpha
Helix 11
AB2
B
52 58Right-handed alpha
Helix 12
AB3
B
72 96Right-handed alpha
Helix 13
AB4
B
104 112Right-handed alpha
Helix 14
AB5
B
116 128Right-handed alpha
Helix 15
AB6
B
172 183Right-handed alpha
Helix 16
AB7
B
218 222Right-handed alpha
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There are 2 sheets in PDB entry 5ZR4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
225 228anti-parallel
Strand 3
A
162 167anti-parallel
Strand 4
A
189 196anti-parallel
Strand 5
A
201 206anti-parallel
Strand 6
A
213 217anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 153first strand
Strand 2
B
224 227anti-parallel
Strand 3
B
162 168anti-parallel
Strand 4
B
189 196anti-parallel
Strand 5
B
201 205anti-parallel
Strand 6
B
213 217anti-parallel
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