Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZRU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZRU entry

There are 2 chains in PDB entry 5ZRU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0GLN 575
C
 HIS 0GLN 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5ZRU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 23Right-handed 310
Helix 2
AA2
A
41 48Right-handed 310
Helix 3
AA3
A
124 128Right-handed 310
Helix 4
AA4
A
187 190Right-handed 310
Helix 5
AA5
A
199 214Right-handed alpha
Helix 6
AA6
A
288 292Right-handed 310
Helix 7
AA7
A
381 385Right-handed 310
Helix 8
AA8
C
19 23Right-handed 310
Helix 9
AA9
C
41 48Right-handed 310
Helix 10
AB1
C
124 128Right-handed 310
Helix 11
AB2
C
187 190Right-handed 310
Helix 12
AB3
C
199 214Right-handed alpha
Helix 13
AB4
C
288 292Right-handed 310
Helix 14
AB5
C
381 385Right-handed 310
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There are 15 sheets in PDB entry 5ZRU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
163 171anti-parallel
Strand 3
A
50 54anti-parallel
Strand 4
A
30 33anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
163 171anti-parallel
Strand 3
A
71 79anti-parallel
Strand 4
A
134 145anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
60 64anti-parallel
Strand 3
A
150 154anti-parallel
Strand 4
A
90 97anti-parallel
Strand 5
A
100 108anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 122first strand
Strand 2
A
114 116anti-parallel
Strand 3
A
129 131anti-parallel
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There are 14 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 185first strand
Strand 2
A
217 219parallel
Strand 3
A
242 246parallel
Strand 4
A
274 282parallel
Strand 5
A
307 314parallel
Strand 6
A
337 339parallel
Strand 7
A
361 363parallel
Strand 8
A
392 394parallel
Strand 9
A
416 418parallel
Strand 10
A
448 456parallel
Strand 11
A
481 492parallel
Strand 12
A
507 520parallel
Strand 13
A
547 558parallel
Strand 14
A
571 575parallel
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There are 13 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 226first strand
Strand 2
A
252 256parallel
Strand 3
A
274 282parallel
Strand 4
A
307 314parallel
Strand 5
A
342 344parallel
Strand 6
A
366 368parallel
Strand 7
A
397 399parallel
Strand 8
A
421 423parallel
Strand 9
A
448 456parallel
Strand 10
A
481 492parallel
Strand 11
A
507 520parallel
Strand 12
A
547 558parallel
Strand 13
C
1 3anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
571 575first strand
Strand 2
A
547 558parallel
Strand 3
C
1 3anti-parallel
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There are 12 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 232first strand
Strand 2
A
266 270parallel
Strand 3
A
298 302parallel
Strand 4
A
320 322parallel
Strand 5
A
351 354parallel
Strand 6
A
375 378parallel
Strand 7
A
404 409parallel
Strand 8
A
428 434parallel
Strand 9
A
472 475parallel
Strand 10
A
499 502parallel
Strand 11
A
539 541parallel
Strand 12
A
564 565parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 18first strand
Strand 2
C
163 171anti-parallel
Strand 3
C
50 54anti-parallel
Strand 4
C
30 33anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 18first strand
Strand 2
C
163 171anti-parallel
Strand 3
C
71 79anti-parallel
Strand 4
C
134 145anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 26first strand
Strand 2
C
60 64anti-parallel
Strand 3
C
150 154anti-parallel
Strand 4
C
90 97anti-parallel
Strand 5
C
100 108anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
121 122first strand
Strand 2
C
114 116anti-parallel
Strand 3
C
129 131anti-parallel
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There are 14 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
184 185first strand
Strand 2
C
217 219parallel
Strand 3
C
242 246parallel
Strand 4
C
274 282parallel
Strand 5
C
307 314parallel
Strand 6
C
337 339parallel
Strand 7
C
361 363parallel
Strand 8
C
392 394parallel
Strand 9
C
416 418parallel
Strand 10
C
448 456parallel
Strand 11
C
481 492parallel
Strand 12
C
507 520parallel
Strand 13
C
547 558parallel
Strand 14
C
571 575parallel
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There are 13 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
222 226first strand
Strand 2
C
252 256parallel
Strand 3
C
274 282parallel
Strand 4
C
307 314parallel
Strand 5
C
342 344parallel
Strand 6
C
366 368parallel
Strand 7
C
397 399parallel
Strand 8
C
421 423parallel
Strand 9
C
448 456parallel
Strand 10
C
481 492parallel
Strand 11
C
507 520parallel
Strand 12
C
547 558parallel
Strand 13
C
571 575parallel
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There are 12 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
230 232first strand
Strand 2
C
266 270parallel
Strand 3
C
298 302parallel
Strand 4
C
320 322parallel
Strand 5
C
351 354parallel
Strand 6
C
375 378parallel
Strand 7
C
404 409parallel
Strand 8
C
428 434parallel
Strand 9
C
472 475parallel
Strand 10
C
499 502parallel
Strand 11
C
539 541parallel
Strand 12
C
564 565parallel
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