Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZS8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZS8 entry

There are 4 chains in PDB entry 5ZS8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 3ASP 235
C
 ALA 2ARG 10
C
 GLY 12ASN 99
C
 ALA 101LYS 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5ZS8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
14 21Right-handed 310
Helix 2
AA2
B
31 48Right-handed alpha
Helix 3
AA3
B
60 74Right-handed alpha
Helix 4
AA4
B
85 88Right-handed 310
Helix 5
AA5
B
92 96Right-handed 310
Helix 6
AA6
B
99 118Right-handed alpha
Helix 7
AA7
B
132 138Right-handed alpha
Helix 8
AA8
B
139 143Right-handed 310
Helix 9
AA9
B
155 177Right-handed alpha
Helix 10
AB1
B
186 199Right-handed alpha
Helix 11
AB2
B
201 208Right-handed alpha
Helix 12
AB3
C
14 20Right-handed alpha
Helix 13
AB4
C
31 48Right-handed alpha
Helix 14
AB5
C
60 74Right-handed alpha
Helix 15
AB6
C
85 88Right-handed 310
Helix 16
AB7
C
92 96Right-handed 310
Helix 17
AB8
C
99 108Right-handed alpha
Helix 18
AB9
C
108 118Right-handed alpha
Helix 19
AC1
C
132 138Right-handed alpha
Helix 20
AC2
C
139 143Right-handed 310
Helix 21
AC3
C
155 171Right-handed alpha
Helix 22
AC4
C
171 177Right-handed alpha
Helix 23
AC5
C
186 199Right-handed alpha
Helix 24
AC6
C
201 206Right-handed alpha
Helix 25
AC7
C
235 241Right-handed alpha
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There are 2 sheets in PDB entry 5ZS8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 83first strand
Strand 2
B
54 57parallel
Strand 3
B
181 185parallel
Strand 4
B
4 10parallel
Strand 5
B
216 220anti-parallel
Strand 6
B
231 232anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 83first strand
Strand 2
C
54 57parallel
Strand 3
C
181 185parallel
Strand 4
C
4 10parallel
Strand 5
C
215 220anti-parallel
Strand 6
C
231 232anti-parallel
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