Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZSL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZSL entry

There are 4 chains in PDB entry 5ZSL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ALA 27	LEU 835
A	ALA 27	LEU 835
D	U 1	A 4
E	U 1	A 4

There are 43 helices in PDB entry 5ZSL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	81	86	Right-handed alpha
Helix 2	AA2	B	164	172	Right-handed 310
Helix 3	AA3	B	273	277	Right-handed 310
Helix 4	AA4	B	306	311	Right-handed 310
Helix 5	AA5	B	326	331	Right-handed alpha
Helix 6	AA6	B	332	339	Right-handed 310
Helix 7	AA7	B	363	369	Right-handed 310
Helix 8	AA8	B	386	394	Right-handed 310
Helix 9	AA9	B	414	421	Right-handed 310
Helix 10	AB1	B	491	495	Right-handed 310
Helix 11	AB2	B	509	514	Right-handed 310
Helix 12	AB3	B	577	582	Right-handed 310
Helix 13	AB4	B	588	595	Right-handed 310
Helix 14	AB5	B	630	635	Right-handed alpha
Helix 15	AB6	B	691	698	Right-handed 310
Helix 16	AB7	B	717	721	Right-handed 310
Helix 17	AB8	B	763	767	Right-handed 310
Helix 18	AB9	B	768	773	Right-handed alpha
Helix 19	AC1	B	788	790	Right-handed 310
Helix 20	AC2	B	791	801	Right-handed alpha
Helix 21	AC3	B	817	821	Right-handed 310
Helix 22	AC4	B	830	835	Right-handed 310
Helix 23	AC5	A	81	86	Right-handed alpha
Helix 24	AC6	A	164	172	Right-handed 310
Helix 25	AC7	A	273	277	Right-handed 310
Helix 26	AC8	A	306	311	Right-handed 310
Helix 27	AC9	A	326	331	Right-handed alpha
Helix 28	AD1	A	332	339	Right-handed 310
Helix 29	AD2	A	363	369	Right-handed 310
Helix 30	AD3	A	386	394	Right-handed 310
Helix 31	AD4	A	414	421	Right-handed 310
Helix 32	AD5	A	491	495	Right-handed 310
Helix 33	AD6	A	509	514	Right-handed 310
Helix 34	AD7	A	577	582	Right-handed 310
Helix 35	AD8	A	588	595	Right-handed 310
Helix 36	AD9	A	630	635	Right-handed alpha
Helix 37	AE1	A	691	698	Right-handed 310
Helix 38	AE2	A	717	721	Right-handed 310
Helix 39	AE3	A	768	773	Right-handed alpha
Helix 40	AE4	A	788	790	Right-handed 310
Helix 41	AE5	A	791	801	Right-handed alpha
Helix 42	AE6	A	817	821	Right-handed 310
Helix 43	AE7	A	830	835	Right-handed 310

There are 12 sheets in PDB entry 5ZSL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 28 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	41	first strand
Strand 2	B	46	50	anti-parallel
Strand 3	B	69	71	parallel
Strand 4	B	93	95	parallel
Strand 5	B	131	133	parallel
Strand 6	B	152	154	parallel
Strand 7	B	176	178	parallel
Strand 8	B	208	210	parallel
Strand 9	B	229	231	parallel
Strand 10	B	253	255	parallel
Strand 11	B	294	296	parallel
Strand 12	B	318	320	parallel
Strand 13	B	344	346	parallel
Strand 14	B	374	376	parallel
Strand 15	B	401	403	parallel
Strand 16	B	425	427	parallel
Strand 17	B	497	499	parallel
Strand 18	B	521	523	parallel
Strand 19	B	546	548	parallel
Strand 20	B	570	572	parallel
Strand 21	B	600	602	parallel
Strand 22	B	623	625	parallel
Strand 23	B	654	656	parallel
Strand 24	B	679	681	parallel
Strand 25	B	703	705	parallel
Strand 26	B	727	729	parallel
Strand 27	B	751	753	parallel
Strand 28	B	777	779	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	80	first strand
Strand 2	B	117	118	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	162	163	first strand
Strand 2	B	194	195	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	384	385	first strand
Strand 2	B	411	412	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	617	618	first strand
Strand 2	B	648	649	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	785	786	first strand
Strand 2	B	814	816	parallel

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There are 28 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	41	first strand
Strand 2	A	46	50	anti-parallel
Strand 3	A	69	71	parallel
Strand 4	A	93	95	parallel
Strand 5	A	131	133	parallel
Strand 6	A	152	154	parallel
Strand 7	A	176	178	parallel
Strand 8	A	208	210	parallel
Strand 9	A	229	231	parallel
Strand 10	A	253	255	parallel
Strand 11	A	294	296	parallel
Strand 12	A	318	320	parallel
Strand 13	A	344	346	parallel
Strand 14	A	374	376	parallel
Strand 15	A	401	403	parallel
Strand 16	A	425	427	parallel
Strand 17	A	497	499	parallel
Strand 18	A	521	523	parallel
Strand 19	A	546	548	parallel
Strand 20	A	570	572	parallel
Strand 21	A	600	602	parallel
Strand 22	A	623	625	parallel
Strand 23	A	654	656	parallel
Strand 24	A	679	681	parallel
Strand 25	A	703	705	parallel
Strand 26	A	727	729	parallel
Strand 27	A	751	753	parallel
Strand 28	A	777	779	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	80	first strand
Strand 2	A	117	118	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	162	163	first strand
Strand 2	A	194	195	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	385	first strand
Strand 2	A	411	412	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	617	618	first strand
Strand 2	A	648	649	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	785	786	first strand
Strand 2	A	814	816	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZSL

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZSL