Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZTB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZTB entry

There are 6 chains in PDB entry 5ZTB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	HIS 1	GLY 65
B	VAL 2	LEU 318
D	ARG 2	GLY 65
A	VAL 2	LEU 318
F	ARG 2	GLY 65
C	VAL 2	LEU 318

There are 42 helices in PDB entry 5ZTB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	21	28	Right-handed alpha
Helix 2	AA2	E	31	33	Right-handed 310
Helix 3	AA3	B	22	41	Right-handed alpha
Helix 4	AA4	B	57	70	Right-handed alpha
Helix 5	AA5	B	83	102	Right-handed alpha
Helix 6	AA6	B	110	115	Right-handed alpha
Helix 7	AA7	B	117	125	Right-handed alpha
Helix 8	AA8	B	128	148	Right-handed alpha
Helix 9	AA9	B	158	172	Right-handed alpha
Helix 10	AB1	B	202	213	Right-handed alpha
Helix 11	AB2	B	222	226	Right-handed 310
Helix 12	AB3	B	228	244	Right-handed alpha
Helix 13	AB4	B	246	258	Right-handed alpha
Helix 14	AB5	B	259	263	Right-handed 310
Helix 15	AB6	B	286	302	Right-handed alpha
Helix 16	AB7	D	21	29	Right-handed alpha
Helix 17	AB8	A	22	42	Right-handed alpha
Helix 18	AB9	A	57	70	Right-handed alpha
Helix 19	AC1	A	83	102	Right-handed alpha
Helix 20	AC2	A	110	115	Right-handed alpha
Helix 21	AC3	A	117	125	Right-handed alpha
Helix 22	AC4	A	128	148	Right-handed alpha
Helix 23	AC5	A	158	172	Right-handed alpha
Helix 24	AC6	A	202	214	Right-handed alpha
Helix 25	AC7	A	222	226	Right-handed 310
Helix 26	AC8	A	228	244	Right-handed alpha
Helix 27	AC9	A	246	258	Right-handed alpha
Helix 28	AD1	A	259	263	Right-handed 310
Helix 29	AD2	A	286	302	Right-handed alpha
Helix 30	AD3	F	21	28	Right-handed alpha
Helix 31	AD4	C	22	41	Right-handed alpha
Helix 32	AD5	C	57	70	Right-handed alpha
Helix 33	AD6	C	83	102	Right-handed alpha
Helix 34	AD7	C	110	115	Right-handed alpha
Helix 35	AD8	C	117	125	Right-handed alpha
Helix 36	AD9	C	128	148	Right-handed alpha
Helix 37	AE1	C	158	172	Right-handed alpha
Helix 38	AE2	C	202	214	Right-handed alpha
Helix 39	AE3	C	222	226	Right-handed 310
Helix 40	AE4	C	228	244	Right-handed alpha
Helix 41	AE5	C	246	258	Right-handed alpha
Helix 42	AE6	C	286	302	Right-handed alpha

There are 15 sheets in PDB entry 5ZTB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	14	first strand
Strand 2	E	2	5	anti-parallel
Strand 3	E	55	60	parallel
Strand 4	E	35	39	anti-parallel
Strand 5	E	42	43	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	20	first strand
Strand 2	E	49	50	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	14	first strand
Strand 2	B	19	21	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	109	first strand
Strand 2	B	73	80	parallel
Strand 3	B	49	53	parallel
Strand 4	B	152	154	parallel
Strand 5	B	193	195	parallel
Strand 6	B	184	185	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	273	first strand
Strand 2	B	280	281	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	13	first strand
Strand 2	D	3	5	anti-parallel
Strand 3	D	56	60	parallel
Strand 4	D	35	39	anti-parallel
Strand 5	D	42	44	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	20	first strand
Strand 2	D	49	50	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	14	first strand
Strand 2	A	19	21	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	109	first strand
Strand 2	A	73	80	parallel
Strand 3	A	49	53	parallel
Strand 4	A	152	154	parallel
Strand 5	A	193	195	parallel
Strand 6	A	184	185	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	273	first strand
Strand 2	A	280	281	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	13	first strand
Strand 2	F	3	5	anti-parallel
Strand 3	F	56	60	parallel
Strand 4	F	35	39	anti-parallel
Strand 5	F	42	44	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	20	first strand
Strand 2	F	49	50	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	14	first strand
Strand 2	C	19	21	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	109	first strand
Strand 2	C	73	80	parallel
Strand 3	C	49	53	parallel
Strand 4	C	152	154	parallel
Strand 5	C	193	195	parallel
Strand 6	C	184	185	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	272	273	first strand
Strand 2	C	280	281	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZTB

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZTB