Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZTE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZTE entry

There are 10 chains in PDB entry 5ZTE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 73	LEU 267
B	PRO 73	HIS 274
C	PRO 73	ALA 265
D	PRO 73	LEU 267
E	PRO 73	ILE 266
F	PRO 73	GLU 268
G	PRO 73	SER 259
H	PRO 73	ALA 265
I	PRO 73	ILE 266
J	PRO 73	ILE 266

There are 79 helices in PDB entry 5ZTE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	98	101	Right-handed 310
Helix 2	AA2	A	117	129	Right-handed alpha
Helix 3	AA3	A	129	136	Right-handed alpha
Helix 4	AA4	A	147	156	Right-handed alpha
Helix 5	AA5	A	158	162	Right-handed 310
Helix 6	AA6	A	177	183	Right-handed alpha
Helix 7	AA7	A	219	236	Right-handed alpha
Helix 8	AA8	A	259	264	Right-handed alpha
Helix 9	AA9	B	98	101	Right-handed 310
Helix 10	AB1	B	117	129	Right-handed alpha
Helix 11	AB2	B	129	135	Right-handed alpha
Helix 12	AB3	B	147	156	Right-handed alpha
Helix 13	AB4	B	158	162	Right-handed 310
Helix 14	AB5	B	177	183	Right-handed alpha
Helix 15	AB6	B	219	236	Right-handed alpha
Helix 16	AB7	B	270	274	Right-handed 310
Helix 17	AB8	C	98	101	Right-handed 310
Helix 18	AB9	C	117	129	Right-handed alpha
Helix 19	AC1	C	129	135	Right-handed alpha
Helix 20	AC2	C	147	156	Right-handed alpha
Helix 21	AC3	C	158	162	Right-handed 310
Helix 22	AC4	C	177	183	Right-handed alpha
Helix 23	AC5	C	219	236	Right-handed alpha
Helix 24	AC6	C	259	265	Right-handed alpha
Helix 25	AC7	D	98	101	Right-handed 310
Helix 26	AC8	D	117	129	Right-handed alpha
Helix 27	AC9	D	129	136	Right-handed alpha
Helix 28	AD1	D	147	156	Right-handed alpha
Helix 29	AD2	D	158	162	Right-handed 310
Helix 30	AD3	D	177	183	Right-handed alpha
Helix 31	AD4	D	219	236	Right-handed alpha
Helix 32	AD5	D	258	264	Right-handed alpha
Helix 33	AD6	E	98	101	Right-handed 310
Helix 34	AD7	E	117	129	Right-handed alpha
Helix 35	AD8	E	129	136	Right-handed alpha
Helix 36	AD9	E	147	156	Right-handed alpha
Helix 37	AE1	E	158	162	Right-handed 310
Helix 38	AE2	E	177	183	Right-handed alpha
Helix 39	AE3	E	219	236	Right-handed alpha
Helix 40	AE4	E	259	265	Right-handed alpha
Helix 41	AE5	F	98	101	Right-handed 310
Helix 42	AE6	F	117	129	Right-handed alpha
Helix 43	AE7	F	129	136	Right-handed alpha
Helix 44	AE8	F	147	156	Right-handed alpha
Helix 45	AE9	F	158	162	Right-handed 310
Helix 46	AF1	F	177	183	Right-handed alpha
Helix 47	AF2	F	219	236	Right-handed alpha
Helix 48	AF3	F	259	264	Right-handed alpha
Helix 49	AF4	G	98	101	Right-handed 310
Helix 50	AF5	G	117	129	Right-handed alpha
Helix 51	AF6	G	129	136	Right-handed alpha
Helix 52	AF7	G	147	156	Right-handed alpha
Helix 53	AF8	G	158	162	Right-handed 310
Helix 54	AF9	G	177	183	Right-handed alpha
Helix 55	AG1	G	219	236	Right-handed alpha
Helix 56	AG2	H	98	101	Right-handed 310
Helix 57	AG3	H	117	129	Right-handed alpha
Helix 58	AG4	H	129	136	Right-handed alpha
Helix 59	AG5	H	147	156	Right-handed alpha
Helix 60	AG6	H	158	162	Right-handed 310
Helix 61	AG7	H	177	183	Right-handed alpha
Helix 62	AG8	H	219	236	Right-handed alpha
Helix 63	AG9	H	259	264	Right-handed alpha
Helix 64	AH1	I	98	101	Right-handed 310
Helix 65	AH2	I	117	129	Right-handed alpha
Helix 66	AH3	I	129	136	Right-handed alpha
Helix 67	AH4	I	147	156	Right-handed alpha
Helix 68	AH5	I	158	162	Right-handed 310
Helix 69	AH6	I	177	183	Right-handed alpha
Helix 70	AH7	I	219	236	Right-handed alpha
Helix 71	AH8	I	255	263	Right-handed alpha
Helix 72	AH9	J	98	101	Right-handed 310
Helix 73	AI1	J	117	129	Right-handed alpha
Helix 74	AI2	J	129	136	Right-handed alpha
Helix 75	AI3	J	147	156	Right-handed alpha
Helix 76	AI4	J	158	162	Right-handed 310
Helix 77	AI5	J	177	183	Right-handed alpha
Helix 78	AI6	J	219	236	Right-handed alpha
Helix 79	AI7	J	258	264	Right-handed alpha

There are 15 sheets in PDB entry 5ZTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	96	first strand
Strand 2	A	83	88	anti-parallel
Strand 3	A	171	173	anti-parallel
Strand 4	A	138	144	parallel
Strand 5	A	105	110	parallel
Strand 6	A	195	200	anti-parallel
Strand 7	A	206	212	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	192	193	anti-parallel

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There are 14 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	96	first strand
Strand 2	B	83	88	anti-parallel
Strand 3	B	171	173	anti-parallel
Strand 4	B	138	144	parallel
Strand 5	B	105	110	parallel
Strand 6	B	195	200	anti-parallel
Strand 7	B	206	212	anti-parallel
Strand 8	C	206	212	anti-parallel
Strand 9	C	195	200	anti-parallel
Strand 10	C	105	110	anti-parallel
Strand 11	C	138	144	parallel
Strand 12	C	171	173	parallel
Strand 13	C	83	88	anti-parallel
Strand 14	C	91	96	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	187	first strand
Strand 2	B	192	193	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	187	first strand
Strand 2	C	192	193	anti-parallel

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There are 14 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	96	first strand
Strand 2	D	83	88	anti-parallel
Strand 3	D	171	173	anti-parallel
Strand 4	D	138	144	parallel
Strand 5	D	105	110	parallel
Strand 6	D	195	200	anti-parallel
Strand 7	D	206	212	anti-parallel
Strand 8	E	206	212	anti-parallel
Strand 9	E	195	200	anti-parallel
Strand 10	E	105	110	anti-parallel
Strand 11	E	138	144	parallel
Strand 12	E	171	173	parallel
Strand 13	E	83	88	anti-parallel
Strand 14	E	91	96	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	187	first strand
Strand 2	D	192	193	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	187	first strand
Strand 2	E	192	193	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	96	first strand
Strand 2	F	83	88	anti-parallel
Strand 3	F	171	173	anti-parallel
Strand 4	F	138	144	parallel
Strand 5	F	105	110	parallel
Strand 6	F	195	200	anti-parallel
Strand 7	F	206	212	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	186	187	first strand
Strand 2	F	192	193	anti-parallel

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There are 14 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	91	96	first strand
Strand 2	G	83	88	anti-parallel
Strand 3	G	171	173	anti-parallel
Strand 4	G	138	144	parallel
Strand 5	G	105	110	parallel
Strand 6	G	195	200	anti-parallel
Strand 7	G	206	212	anti-parallel
Strand 8	H	206	212	anti-parallel
Strand 9	H	195	200	anti-parallel
Strand 10	H	105	110	anti-parallel
Strand 11	H	138	144	parallel
Strand 12	H	171	173	parallel
Strand 13	H	83	88	anti-parallel
Strand 14	H	91	96	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	186	187	first strand
Strand 2	H	192	193	anti-parallel

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There are 14 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	91	96	first strand
Strand 2	I	83	88	anti-parallel
Strand 3	I	171	173	anti-parallel
Strand 4	I	138	144	parallel
Strand 5	I	105	110	parallel
Strand 6	I	195	200	anti-parallel
Strand 7	I	206	212	anti-parallel
Strand 8	J	206	212	anti-parallel
Strand 9	J	195	200	anti-parallel
Strand 10	J	105	110	anti-parallel
Strand 11	J	138	144	parallel
Strand 12	J	171	173	parallel
Strand 13	J	83	88	anti-parallel
Strand 14	J	91	96	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	186	187	first strand
Strand 2	I	192	193	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	186	187	first strand
Strand 2	J	192	193	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZTE

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZTE