Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZTJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZTJ entry

There is 1 chain in PDB entry 5ZTJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 536VAL 839
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 5ZTJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
554 559Right-handed alpha
Helix 2
AA2
A
605 607Right-handed 310
Helix 3
AA3
A
620 622Right-handed 310
Helix 4
AA4
A
661 664Right-handed 310
Helix 5
AA5
A
709 711Right-handed 310
Helix 6
AA6
A
757 761Right-handed 310
Helix 7
AA7
A
810 812Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 5ZTJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 584first strand
Strand 2
A
539 544anti-parallel
Strand 3
A
548 553anti-parallel
Strand 4
A
617 618anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
631 637first strand
Strand 2
A
589 594anti-parallel
Strand 3
A
598 603anti-parallel
Strand 4
A
671 672anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
682 688first strand
Strand 2
A
645 650anti-parallel
Strand 3
A
654 659anti-parallel
Strand 4
A
721 722anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
732 736first strand
Strand 2
A
693 698anti-parallel
Strand 3
A
702 707anti-parallel
Strand 4
A
771 772anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
783 789first strand
Strand 2
A
743 748anti-parallel
Strand 3
A
752 756anti-parallel
Strand 4
A
822 823anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
804 808first strand
Strand 2
A
794 799anti-parallel
Strand 3
A
833 838anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il