Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZTX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZTX entry

There are 2 chains in PDB entry 5ZTX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 30ALA 454
B
 PRO 4ALA 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 5ZTX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 58Right-handed alpha
Helix 2
AA2
A
65 79Right-handed alpha
Helix 3
AA3
A
91 104Right-handed alpha
Helix 4
AA4
A
116 135Right-handed alpha
Helix 5
AA5
A
154 161Right-handed alpha
Helix 6
AA6
A
163 170Right-handed 310
Helix 7
AA7
A
183 188Right-handed alpha
Helix 8
AA8
A
193 213Right-handed alpha
Helix 9
AA9
A
237 249Right-handed alpha
Helix 10
AB1
A
269 274Right-handed alpha
Helix 11
AB2
A
284 289Right-handed 310
Helix 12
AB3
A
300 311Right-handed alpha
Helix 13
AB4
A
313 315Right-handed 310
Helix 14
AB5
A
326 343Right-handed alpha
Helix 15
AB6
A
344 364Right-handed alpha
Helix 16
AB7
A
394 397Right-handed 310
Helix 17
AB8
A
398 410Right-handed alpha
Helix 18
AB9
A
430 454Right-handed alpha
Helix 19
AC1
B
6 15Right-handed alpha
Helix 20
AC2
B
16 19Right-handed 310
Helix 21
AC3
B
65 78Right-handed alpha
Helix 22
AC4
B
90 104Right-handed alpha
Helix 23
AC5
B
116 135Right-handed alpha
Helix 24
AC6
B
164 168Right-handed 310
Helix 25
AC7
B
183 188Right-handed alpha
Helix 26
AC8
B
193 213Right-handed alpha
Helix 27
AC9
B
237 248Right-handed alpha
Helix 28
AD1
B
269 274Right-handed alpha
Helix 29
AD2
B
284 289Right-handed 310
Helix 30
AD3
B
300 312Right-handed alpha
Helix 31
AD4
B
326 343Right-handed alpha
Helix 32
AD5
B
344 364Right-handed alpha
Helix 33
AD6
B
394 397Right-handed 310
Helix 34
AD7
B
398 410Right-handed alpha
Helix 35
AD8
B
430 455Right-handed alpha
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There are 6 sheets in PDB entry 5ZTX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
40 43anti-parallel
Strand 3
A
48 51anti-parallel
Strand 4
A
412 413parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
B
31 37parallel
Strand 3
B
40 43anti-parallel
Strand 4
B
48 51anti-parallel
Strand 5
B
412 413parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 114first strand
Strand 2
A
295 299anti-parallel
Strand 3
A
280 283anti-parallel
Strand 4
A
253 256parallel
Strand 5
A
217 222parallel
Strand 6
A
142 146parallel
Strand 7
A
176 179parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 375first strand
Strand 2
A
378 383anti-parallel
Strand 3
A
420 423anti-parallel
Strand 4
A
415 417anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 114first strand
Strand 2
B
295 299anti-parallel
Strand 3
B
280 283anti-parallel
Strand 4
B
253 256parallel
Strand 5
B
217 222parallel
Strand 6
B
142 145parallel
Strand 7
B
176 178parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 375first strand
Strand 2
B
378 383anti-parallel
Strand 3
B
420 423anti-parallel
Strand 4
B
415 417anti-parallel
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