Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZU5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZU5 entry

There is 1 chain in PDB entry 5ZU5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1LYS 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 5ZU5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 32Right-handed 310
Helix 2
AA2
A
146 150Right-handed 310
Helix 3
AA3
A
152 177Right-handed alpha
Helix 4
AA4
A
191 196Right-handed alpha
Helix 5
AA5
A
220 225Right-handed alpha
Helix 6
AA6
A
248 253Right-handed alpha
Helix 7
AA7
A
319 326Right-handed alpha
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There are 5 sheets in PDB entry 5ZU5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 20first strand
Strand 2
A
48 66anti-parallel
Strand 3
A
129 138anti-parallel
Strand 4
A
40 43anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 20first strand
Strand 2
A
48 66anti-parallel
Strand 3
A
104 124anti-parallel
Strand 4
A
74 81anti-parallel
Strand 5
A
88 95anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 247first strand
Strand 2
A
230 234anti-parallel
Strand 3
A
289 294anti-parallel
Strand 4
A
460 467anti-parallel
Strand 5
A
353 360anti-parallel
Strand 6
A
367 372anti-parallel
Strand 7
A
381 388anti-parallel
Strand 8
A
393 400anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
270 275anti-parallel
Strand 3
A
477 490anti-parallel
Strand 4
A
328 341anti-parallel
Strand 5
A
313 314parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
270 275anti-parallel
Strand 3
A
477 490anti-parallel
Strand 4
A
328 341anti-parallel
Strand 5
A
418 425anti-parallel
Strand 6
A
428 435anti-parallel
Strand 7
A
441 446anti-parallel
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