Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZUL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZUL entry

There are 6 chains in PDB entry 5ZUL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 22VAL 117
B
 GLN 16ARG 130
C
 GLY 20ALA 118
D
 GLY 20ARG 130
E
 SER 22VAL 117
F
 VAL 18ILE 128
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5ZUL

There are 12 sheets in PDB entry 5ZUL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
85 92parallel
Strand 3
A
61 68anti-parallel
Strand 4
A
54 57anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
38 44anti-parallel
Strand 3
A
110 116anti-parallel
Strand 4
A
103 107anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 27first strand
Strand 2
B
85 92parallel
Strand 3
B
61 68anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
39 44anti-parallel
Strand 3
B
110 115anti-parallel
Strand 4
B
103 107anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 27first strand
Strand 2
C
85 92parallel
Strand 3
C
61 68anti-parallel
Strand 4
C
54 57anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 35first strand
Strand 2
C
38 44anti-parallel
Strand 3
C
110 116anti-parallel
Strand 4
C
103 107anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 35first strand
Strand 2
D
38 44anti-parallel
Strand 3
D
110 116anti-parallel
Strand 4
D
103 107anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 68first strand
Strand 2
D
85 92anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
26 27first strand
Strand 2
E
85 92parallel
Strand 3
E
61 68anti-parallel
Strand 4
E
54 58anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
103 107first strand
Strand 2
E
110 116anti-parallel
Strand 3
E
38 44anti-parallel
Strand 4
E
30 35anti-parallel
Strand 5
F
79 80anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
79 80first strand
Strand 2
F
30 34anti-parallel
Strand 3
F
38 44anti-parallel
Strand 4
F
110 116anti-parallel
Strand 5
F
103 107anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
61 68first strand
Strand 2
F
85 92anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il