Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZUU entry

There are 8 chains in PDB entry 5ZUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 PRO 221GLU 394
A
 THR 228ALA 389
B
 SER 229GLU 392
D
 SER 229GLU 389
E
 C 2 G 5
F
 C 2 G 5
G
 C 2 A 4
I
 C 2 A 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5ZUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
246 257Right-handed alpha
Helix 2
AA2
C
262 264Right-handed 310
Helix 3
AA3
C
265 276Right-handed alpha
Helix 4
AA4
C
336 339Right-handed 310
Helix 5
AA5
C
343 347Right-handed 310
Helix 6
AA6
C
361 375Right-handed alpha
Helix 7
AA7
C
379 393Right-handed alpha
Helix 8
AA8
A
246 257Right-handed alpha
Helix 9
AA9
A
262 264Right-handed 310
Helix 10
AB1
A
265 276Right-handed alpha
Helix 11
AB2
A
343 347Right-handed 310
Helix 12
AB3
A
361 374Right-handed alpha
Helix 13
AB4
A
378 389Right-handed alpha
Helix 14
AB5
B
246 257Right-handed alpha
Helix 15
AB6
B
262 264Right-handed 310
Helix 16
AB7
B
265 276Right-handed alpha
Helix 17
AB8
B
343 347Right-handed 310
Helix 18
AB9
B
361 374Right-handed alpha
Helix 19
AC1
B
379 391Right-handed alpha
Helix 20
AC2
D
246 257Right-handed alpha
Helix 21
AC3
D
262 264Right-handed 310
Helix 22
AC4
D
265 276Right-handed alpha
Helix 23
AC5
D
332 335Right-handed 310
Helix 24
AC6
D
339 343Right-handed 310
Helix 25
AC7
D
357 371Right-handed alpha
Helix 26
AC8
D
375 386Right-handed alpha
Helix 27
AC9
D
387 389Right-handed 310
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There are 4 sheets in PDB entry 5ZUU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
258 259first strand
Strand 2
C
323 334anti-parallel
Strand 3
C
290 297anti-parallel
Strand 4
C
278 285anti-parallel
Strand 5
C
237 244parallel
Strand 6
C
358 360anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
323 334anti-parallel
Strand 3
A
290 297anti-parallel
Strand 4
A
278 285anti-parallel
Strand 5
A
237 244parallel
Strand 6
A
358 360anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 260first strand
Strand 2
B
322 334anti-parallel
Strand 3
B
290 297anti-parallel
Strand 4
B
278 285anti-parallel
Strand 5
B
237 244parallel
Strand 6
B
358 360anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
258 259first strand
Strand 2
D
319 330anti-parallel
Strand 3
D
290 297anti-parallel
Strand 4
D
278 285anti-parallel
Strand 5
D
237 244parallel
Strand 6
D
354 356anti-parallel
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