Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZVC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZVC entry

There are 2 chains in PDB entry 5ZVC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 225MET 532
B
 THR 224THR 534
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5ZVC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
233 237Right-handed 310
Helix 2
AA2
A
279 283Right-handed 310
Helix 3
AA3
A
342 346Right-handed 310
Helix 4
AA4
A
364 367Right-handed 310
Helix 5
AA5
A
456 467Right-handed alpha
Helix 6
AA6
B
233 237Right-handed 310
Helix 7
AA7
B
279 283Right-handed 310
Helix 8
AA8
B
342 346Right-handed 310
Helix 9
AA9
B
364 367Right-handed 310
Helix 10
AB1
B
456 467Right-handed alpha
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There are 6 sheets in PDB entry 5ZVC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
450 453first strand
Strand 2
A
429 437anti-parallel
Strand 3
A
248 252anti-parallel
Strand 4
A
507 508anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
450 453first strand
Strand 2
A
429 437anti-parallel
Strand 3
A
498 502anti-parallel
Strand 4
A
486 494anti-parallel
Strand 5
A
474 481anti-parallel
Strand 6
A
516 523anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 292first strand
Strand 2
A
301 305anti-parallel
Strand 3
A
369 374anti-parallel
Strand 4
A
352 357anti-parallel
Strand 5
A
331 337anti-parallel
Strand 6
A
384 393anti-parallel
Strand 7
A
286 292anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
450 453first strand
Strand 2
B
429 437anti-parallel
Strand 3
B
248 252anti-parallel
Strand 4
B
507 508anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
450 453first strand
Strand 2
B
429 437anti-parallel
Strand 3
B
498 502anti-parallel
Strand 4
B
487 494anti-parallel
Strand 5
B
474 480anti-parallel
Strand 6
B
516 523anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
286 292first strand
Strand 2
B
301 305anti-parallel
Strand 3
B
369 376anti-parallel
Strand 4
B
352 357anti-parallel
Strand 5
B
331 337anti-parallel
Strand 6
B
384 393anti-parallel
Strand 7
B
286 292anti-parallel
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