Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZVL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZVL entry

There are 5 chains in PDB entry 5ZVL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 48ALA 151
B
 ALA 44ALA 151
C
 ILE 47ILE 152
D
 ILE 47ILE 152
E
 ASP 49ALA 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5ZVL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 61Right-handed alpha
Helix 2
AA2
A
73 85Right-handed alpha
Helix 3
AA3
A
101 113Right-handed alpha
Helix 4
AA4
A
129 134Right-handed alpha
Helix 5
AA5
A
134 139Right-handed alpha
Helix 6
AA6
A
141 150Right-handed alpha
Helix 7
AA7
B
49 62Right-handed alpha
Helix 8
AA8
B
73 86Right-handed alpha
Helix 9
AA9
B
96 98Right-handed 310
Helix 10
AB1
B
102 113Right-handed alpha
Helix 11
AB2
B
129 139Right-handed alpha
Helix 12
AB3
B
140 146Right-handed alpha
Helix 13
AB4
C
52 61Right-handed alpha
Helix 14
AB5
C
73 86Right-handed alpha
Helix 15
AB6
C
96 99Right-handed 310
Helix 16
AB7
C
100 113Right-handed alpha
Helix 17
AB8
C
131 139Right-handed alpha
Helix 18
AB9
C
140 148Right-handed alpha
Helix 19
AC1
D
53 61Right-handed alpha
Helix 20
AC2
D
73 86Right-handed alpha
Helix 21
AC3
D
100 113Right-handed alpha
Helix 22
AC4
D
129 134Right-handed alpha
Helix 23
AC5
D
141 149Right-handed alpha
Helix 24
AC6
E
52 61Right-handed alpha
Helix 25
AC7
E
73 83Right-handed alpha
Helix 26
AC8
E
96 98Right-handed 310
Helix 27
AC9
E
100 102Right-handed 310
Helix 28
AD1
E
103 108Right-handed alpha
Helix 29
AD2
E
108 113Right-handed alpha
Helix 30
AD3
E
140 150Right-handed alpha
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There are 5 sheets in PDB entry 5ZVL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 94first strand
Strand 2
A
65 69parallel
Strand 3
A
119 122anti-parallel
Strand 4
A
126 128anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 94first strand
Strand 2
B
65 69parallel
Strand 3
B
119 122anti-parallel
Strand 4
B
126 128anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
90 94first strand
Strand 2
C
65 69parallel
Strand 3
C
119 122anti-parallel
Strand 4
C
125 128anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
66 69first strand
Strand 2
D
91 94parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
90 94first strand
Strand 2
E
65 69parallel
Strand 3
E
119 122anti-parallel
Strand 4
E
126 128anti-parallel
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