Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZW0 entry

There are 2 chains in PDB entry 5ZW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 382
B
 MET 1ARG 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5ZW0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 23Right-handed alpha
Helix 2
AA2
A
27 34Right-handed alpha
Helix 3
AA3
A
38 49Right-handed alpha
Helix 4
AA4
A
56 60Right-handed 310
Helix 5
AA5
A
65 80Right-handed alpha
Helix 6
AA6
A
82 96Right-handed alpha
Helix 7
AA7
A
96 104Right-handed alpha
Helix 8
AA8
A
105 118Right-handed alpha
Helix 9
AA9
A
162 165Right-handed 310
Helix 10
AB1
A
232 270Right-handed alpha
Helix 11
AB2
A
280 310Right-handed alpha
Helix 12
AB3
A
314 341Right-handed alpha
Helix 13
AB4
A
342 344Right-handed 310
Helix 14
AB5
A
350 359Right-handed alpha
Helix 15
AB6
A
360 363Right-handed 310
Helix 16
AB7
A
367 380Right-handed alpha
Helix 17
AB8
B
6 23Right-handed alpha
Helix 18
AB9
B
27 34Right-handed alpha
Helix 19
AC1
B
38 49Right-handed alpha
Helix 20
AC2
B
56 60Right-handed 310
Helix 21
AC3
B
65 80Right-handed alpha
Helix 22
AC4
B
82 96Right-handed alpha
Helix 23
AC5
B
96 104Right-handed alpha
Helix 24
AC6
B
105 118Right-handed alpha
Helix 25
AC7
B
162 165Right-handed 310
Helix 26
AC8
B
232 270Right-handed alpha
Helix 27
AC9
B
280 310Right-handed alpha
Helix 28
AD1
B
314 341Right-handed alpha
Helix 29
AD2
B
342 344Right-handed 310
Helix 30
AD3
B
350 359Right-handed alpha
Helix 31
AD4
B
360 363Right-handed 310
Helix 32
AD5
B
367 380Right-handed alpha
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There are 6 sheets in PDB entry 5ZW0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 126first strand
Strand 2
A
167 173parallel
Strand 3
A
183 189anti-parallel
Strand 4
A
226 227anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 146first strand
Strand 2
A
149 160anti-parallel
Strand 3
A
211 222anti-parallel
Strand 4
A
195 197anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 272first strand
Strand 2
A
275 276anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 126first strand
Strand 2
B
167 172parallel
Strand 3
B
184 189anti-parallel
Strand 4
B
226 227anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 146first strand
Strand 2
B
149 160anti-parallel
Strand 3
B
211 222anti-parallel
Strand 4
B
195 197anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 272first strand
Strand 2
B
275 276anti-parallel
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