Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZW4 entry

There are 2 chains in PDB entry 5ZW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ARG 217
D
 C 27 G 43
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5ZW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 16Right-handed alpha
Helix 2
AA2
A
20 33Right-handed alpha
Helix 3
AA3
A
39 54Right-handed alpha
Helix 4
AA4
A
66 76Right-handed alpha
Helix 5
AA5
A
87 101Right-handed alpha
Helix 6
AA6
A
113 116Right-handed 310
Helix 7
AA7
A
117 123Right-handed alpha
Helix 8
AA8
A
135 137Right-handed 310
Helix 9
AA9
A
138 147Right-handed alpha
Helix 10
AB1
A
162 169Right-handed 310
Helix 11
AB2
A
176 196Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5ZW4.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 111first strand
Strand 2
A
80 85parallel
Strand 3
A
57 61parallel
Strand 4
A
127 132parallel
Strand 5
A
150 159parallel
Strand 6
A
210 215anti-parallel
Strand 7
A
199 204anti-parallel
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