Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZW9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZW9 entry

There are 2 chains in PDB entry 5ZW9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 16PRO 283
B
 ASN 15PRO 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5ZW9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 47Right-handed alpha
Helix 2
AA2
A
74 88Right-handed alpha
Helix 3
AA3
A
104 122Right-handed alpha
Helix 4
AA4
A
145 154Right-handed alpha
Helix 5
AA5
A
155 158Right-handed 310
Helix 6
AA6
A
164 173Right-handed alpha
Helix 7
AA7
A
178 190Right-handed alpha
Helix 8
AA8
A
234 250Right-handed alpha
Helix 9
AA9
A
252 274Right-handed alpha
Helix 10
AB1
B
36 47Right-handed alpha
Helix 11
AB2
B
74 88Right-handed alpha
Helix 12
AB3
B
104 122Right-handed alpha
Helix 13
AB4
B
145 154Right-handed alpha
Helix 14
AB5
B
164 173Right-handed alpha
Helix 15
AB6
B
178 190Right-handed alpha
Helix 16
AB7
B
234 250Right-handed alpha
Helix 17
AB8
B
252 275Right-handed alpha
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There are 4 sheets in PDB entry 5ZW9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
51 59anti-parallel
Strand 3
A
23 30parallel
Strand 4
A
96 99parallel
Strand 5
A
126 129parallel
Strand 6
A
160 161parallel
Strand 7
A
196 202parallel
Strand 8
A
208 214anti-parallel
Strand 9
A
221 226anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
139 140anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
51 59anti-parallel
Strand 3
B
23 30parallel
Strand 4
B
96 99parallel
Strand 5
B
126 129parallel
Strand 6
B
160 161parallel
Strand 7
B
196 199parallel
Strand 8
B
211 215anti-parallel
Strand 9
B
219 223anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 135first strand
Strand 2
B
139 140anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il