Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZWB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZWB entry

There are 6 chains in PDB entry 5ZWB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 14VAL 125
A
 ILE 127LEU 232
A
 GLY 234ALA 284
B
 ASP 14VAL 125
B
 ILE 127GLY 275
B
 ASP 277ALA 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5ZWB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 47Right-handed alpha
Helix 2
AA2
A
74 88Right-handed alpha
Helix 3
AA3
A
104 122Right-handed alpha
Helix 4
AA4
A
145 154Right-handed alpha
Helix 5
AA5
A
155 158Right-handed 310
Helix 6
AA6
A
164 173Right-handed alpha
Helix 7
AA7
A
178 190Right-handed alpha
Helix 8
AA8
A
234 249Right-handed alpha
Helix 9
AA9
A
252 275Right-handed alpha
Helix 10
AB1
B
36 47Right-handed alpha
Helix 11
AB2
B
74 88Right-handed alpha
Helix 12
AB3
B
104 122Right-handed alpha
Helix 13
AB4
B
145 154Right-handed alpha
Helix 14
AB5
B
155 158Right-handed 310
Helix 15
AB6
B
164 173Right-handed alpha
Helix 16
AB7
B
178 190Right-handed alpha
Helix 17
AB8
B
234 249Right-handed alpha
Helix 18
AB9
B
252 275Right-handed alpha
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There are 4 sheets in PDB entry 5ZWB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
51 59anti-parallel
Strand 3
A
23 30parallel
Strand 4
A
96 99parallel
Strand 5
A
126 129parallel
Strand 6
A
160 161parallel
Strand 7
A
196 202parallel
Strand 8
A
209 216anti-parallel
Strand 9
A
220 226anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
139 140anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
51 59anti-parallel
Strand 3
B
23 30parallel
Strand 4
B
96 99parallel
Strand 5
B
126 129parallel
Strand 6
B
160 161parallel
Strand 7
B
196 202parallel
Strand 8
B
209 215anti-parallel
Strand 9
B
220 226anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 135first strand
Strand 2
B
139 140anti-parallel
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