Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZWL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZWL entry

There are 2 chains in PDB entry 5ZWL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 MET 1ILE 138
G
 MET 24ALA 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5ZWL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
85 87Right-handed 310
Helix 2
AA2
E
88 109Right-handed alpha
Helix 3
AA3
E
111 134Right-handed alpha
Helix 4
AA4
G
27 42Right-handed alpha
Helix 5
AA5
G
42 58Right-handed alpha
Helix 6
AA6
G
61 65Right-handed 310
Helix 7
AA7
G
67 71Right-handed 310
Helix 8
AA8
G
92 111Right-handed alpha
Helix 9
AA9
G
121 131Right-handed alpha
Helix 10
AB1
G
147 164Right-handed alpha
Helix 11
AB2
G
194 200Right-handed alpha
Helix 12
AB3
G
238 277Right-handed alpha
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There are 4 sheets in PDB entry 5ZWL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
13 19first strand
Strand 2
E
3 8anti-parallel
Strand 3
E
73 78parallel
Strand 4
E
57 70anti-parallel
Strand 5
E
40 52anti-parallel
Strand 6
E
81 83first strand
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
29 34first strand
Strand 2
E
21 26anti-parallel
Strand 3
E
40 52anti-parallel
Strand 4
E
57 70anti-parallel
Strand 5
G
234 235first strand
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
135 139first strand
Strand 2
G
114 120parallel
Strand 3
G
77 83parallel
Strand 4
G
169 177parallel
Strand 5
G
183 191anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
204 210first strand
Strand 2
G
215 221anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il